| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333412
Identifier: 158333412
GI number: 158333412
Start: 187549
End: 188475
Strand: Reverse
Name: 158333412
Synonym: AM1_0184
Alternate gene names: NA
Gene position: 188475-187549 (Counterclockwise)
Preceding gene: 158333413
Following gene: 158333410
Centisome position: 2.9
GC content: 51.89
Gene sequence:
>927_bases ATGCATCCATCCTTCAACCTCAAATTATCCTTGCTGGGGGTGCTGACTTTAACTCAGCTCTTGGGCTGTCAGACTGGAGT GAAGCCATCGTCTTTAACGCCAACTCAGTGCGAGCAGGGGGGGGATTTCGTTTGGATTGAGGGGGGAGACTATATCCTCG GGAGCGATCGCCAAGAACGAGATTATGCCTATCGCATCTCAGCAGCGGCCTCGGCCCAGCAACCGGAACAGCGGGCCAAA GCGGAAGCCCGTTTACGCAAAAGGGGCTGGTTCGATGGAGAACCGAATCGGCAGGTGCGATCGCAACCATCAGTTTGTAT GGGAAAAAACCTGATCACCAATGCGGAATACCAAGCCTTCGTTAAAGCCACGGGTCATCGTTCGCCATTTATTTCTGCTG ATGATTATCAAAAACAAGGGTTCCTAGTGCACCCCTATCTCTCCGTCAAACCCTTTCTTTGGCAAGGTCAACGCTTTCCA ACGGGTAAAGGTCAGCACCCCGTTGTTTTAGTGTCTTATCCCGATGCCCAAGCCTTTGCTCAATGGCGAGGCCAACAAGA TGGACAGTCCTATCGCTTACCCACTGCCTTAGAGTGGGAGCAAGCCGCTCGGGGAACCGATGGCCGCTACTTTCCTTGGG GCAATGATTGGCAAGCCGATGCCACCAACTGGGCTAATCATGGTGGACTGCAGACCAGTGCGATCGCAACTTATCCCCTC AGTCGGAGTCCAGCCGGGGTAGAAGATATGGCGGGAAATGTCTTTGAATATACATCTACCCTAACGCAACAGGTCATTCG CTCAGCAGTTGTAATGAAGGGATGCTCGTGGGATGATTCACCGGGCTTTTGTCGAGCGGCCTACCAACATTCCCGTTCCC AAAATTCTCGTCATATTCTTTTTGGTTTTCGCCTAGTTAAAGAGTAA
Upstream 100 bases:
>100_bases ACGGATATGTAGTCCCAGACCTAGGCAGACTTCCCCTTTGAGCCTTTGGAAACCTGCCCCCTTAAGATAAAAAGGGTTAC TCTCAATCCTTTGGAGACCC
Downstream 100 bases:
>100_bases AGGTGCCAGATCTTCAGCTCCACGCTCCCTTGAATGAATCTCGTTGAACCTTAAAACTCAGGCAGTTGAATCGATAGATC TTGAACCCAGCGATGGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MHPSFNLKLSLLGVLTLTQLLGCQTGVKPSSLTPTQCEQGGDFVWIEGGDYILGSDRQERDYAYRISAAASAQQPEQRAK AEARLRKRGWFDGEPNRQVRSQPSVCMGKNLITNAEYQAFVKATGHRSPFISADDYQKQGFLVHPYLSVKPFLWQGQRFP TGKGQHPVVLVSYPDAQAFAQWRGQQDGQSYRLPTALEWEQAARGTDGRYFPWGNDWQADATNWANHGGLQTSAIATYPL SRSPAGVEDMAGNVFEYTSTLTQQVIRSAVVMKGCSWDDSPGFCRAAYQHSRSQNSRHILFGFRLVKE
Sequences:
>Translated_308_residues MHPSFNLKLSLLGVLTLTQLLGCQTGVKPSSLTPTQCEQGGDFVWIEGGDYILGSDRQERDYAYRISAAASAQQPEQRAK AEARLRKRGWFDGEPNRQVRSQPSVCMGKNLITNAEYQAFVKATGHRSPFISADDYQKQGFLVHPYLSVKPFLWQGQRFP TGKGQHPVVLVSYPDAQAFAQWRGQQDGQSYRLPTALEWEQAARGTDGRYFPWGNDWQADATNWANHGGLQTSAIATYPL SRSPAGVEDMAGNVFEYTSTLTQQVIRSAVVMKGCSWDDSPGFCRAAYQHSRSQNSRHILFGFRLVKE >Mature_308_residues MHPSFNLKLSLLGVLTLTQLLGCQTGVKPSSLTPTQCEQGGDFVWIEGGDYILGSDRQERDYAYRISAAASAQQPEQRAK AEARLRKRGWFDGEPNRQVRSQPSVCMGKNLITNAEYQAFVKATGHRSPFISADDYQKQGFLVHPYLSVKPFLWQGQRFP TGKGQHPVVLVSYPDAQAFAQWRGQQDGQSYRLPTALEWEQAARGTDGRYFPWGNDWQADATNWANHGGLQTSAIATYPL SRSPAGVEDMAGNVFEYTSTLTQQVIRSAVVMKGCSWDDSPGFCRAAYQHSRSQNSRHILFGFRLVKE
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI194248088, Length=223, Percent_Identity=30.9417040358744, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI226437577, Length=153, Percent_Identity=35.9477124183007, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI194248087, Length=213, Percent_Identity=30.5164319248826, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34433; Mature: 34433
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPSFNLKLSLLGVLTLTQLLGCQTGVKPSSLTPTQCEQGGDFVWIEGGDYILGSDRQER CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCCCEEECCCCCCC DYAYRISAAASAQQPEQRAKAEARLRKRGWFDGEPNRQVRSQPSVCMGKNLITNAEYQAF CEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCHHCCCHHHEE VKATGHRSPFISADDYQKQGFLVHPYLSVKPFLWQGQRFPTGKGQHPVVLVSYPDAQAFA EEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHH QWRGQQDGQSYRLPTALEWEQAARGTDGRYFPWGNDWQADATNWANHGGLQTSAIATYPL HHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC SRSPAGVEDMAGNVFEYTSTLTQQVIRSAVVMKGCSWDDSPGFCRAAYQHSRSQNSRHIL CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEE FGFRLVKE EEEEEECC >Mature Secondary Structure MHPSFNLKLSLLGVLTLTQLLGCQTGVKPSSLTPTQCEQGGDFVWIEGGDYILGSDRQER CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCCCEEECCCCCCC DYAYRISAAASAQQPEQRAKAEARLRKRGWFDGEPNRQVRSQPSVCMGKNLITNAEYQAF CEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCHHCCCHHHEE VKATGHRSPFISADDYQKQGFLVHPYLSVKPFLWQGQRFPTGKGQHPVVLVSYPDAQAFA EEECCCCCCCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHH QWRGQQDGQSYRLPTALEWEQAARGTDGRYFPWGNDWQADATNWANHGGLQTSAIATYPL HHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC SRSPAGVEDMAGNVFEYTSTLTQQVIRSAVVMKGCSWDDSPGFCRAAYQHSRSQNSRHIL CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEE FGFRLVKE EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA