Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158333392

Identifier: 158333392

GI number: 158333392

Start: 163392

End: 163829

Strand: Reverse

Name: 158333392

Synonym: AM1_0164

Alternate gene names: NA

Gene position: 163829-163392 (Counterclockwise)

Preceding gene: 158333394

Following gene: 158333391

Centisome position: 2.52

GC content: 44.75

Gene sequence:

>438_bases
TTGTTTTCCTTCTCAATCGCTTTGCTCATTATTCTTAATTTGGAGAAAATCATGACTACTTCTTCCCCAATCACTCCCGT
CAGCGAAGAAACCCGAGCCCTAGTTAATCAAAAGATGGCGAATGAGTCAGATGAGATTAAGCAAAAAGCCGGCGAGTTGG
TCGACTTAATTAAAAAGCGGGCCGAATCTGAACTTTCTGCTGCTGACCAAATCACCCGTGAAACCTATCATCAGGCCATC
AGCCAAGCGAAGGCAACCCTCAATCAAACAGAAACCTTTTTCCAAGAACAAGGCAATGCTTTGGATCAGTCTCTTAAAGA
ACTCAATGATGATGCCAGTCGCAAATGGGACACCTTTGTGGCTGAACTCAAAGGCATGGGAGATCGCTTCGATAAAGCCG
TGAATTCTGCTTGGGCTGCCTTGATTAAGGAGTCATAG

Upstream 100 bases:

>100_bases
AGGAGATAGCCGCCGACCATGCATTAACGGCAGTCGGATAAACCACGGTTGTGCATCACCTTTCCACCCAAATCACACCG
ATTTAGCGAGGAGACAAACT

Downstream 100 bases:

>100_bases
CTGGATTTTGCCAATGATGGCCTGAAGGGCCTCTGAACTCTTTCCCCTTAGTTAGTGCTTGTACGTTCCGAAGTTCTAAT
CCCAGGGGAAGGAGTGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MFSFSIALLIILNLEKIMTTSSPITPVSEETRALVNQKMANESDEIKQKAGELVDLIKKRAESELSAADQITRETYHQAI
SQAKATLNQTETFFQEQGNALDQSLKELNDDASRKWDTFVAELKGMGDRFDKAVNSAWAALIKES

Sequences:

>Translated_145_residues
MFSFSIALLIILNLEKIMTTSSPITPVSEETRALVNQKMANESDEIKQKAGELVDLIKKRAESELSAADQITRETYHQAI
SQAKATLNQTETFFQEQGNALDQSLKELNDDASRKWDTFVAELKGMGDRFDKAVNSAWAALIKES
>Mature_145_residues
MFSFSIALLIILNLEKIMTTSSPITPVSEETRALVNQKMANESDEIKQKAGELVDLIKKRAESELSAADQITRETYHQAI
SQAKATLNQTETFFQEQGNALDQSLKELNDDASRKWDTFVAELKGMGDRFDKAVNSAWAALIKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16198; Mature: 16198

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFSIALLIILNLEKIMTTSSPITPVSEETRALVNQKMANESDEIKQKAGELVDLIKKR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AESELSAADQITRETYHQAISQAKATLNQTETFFQEQGNALDQSLKELNDDASRKWDTFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHH
AELKGMGDRFDKAVNSAWAALIKES
HHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSFSIALLIILNLEKIMTTSSPITPVSEETRALVNQKMANESDEIKQKAGELVDLIKKR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AESELSAADQITRETYHQAISQAKATLNQTETFFQEQGNALDQSLKELNDDASRKWDTFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHH
AELKGMGDRFDKAVNSAWAALIKES
HHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA