| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333338
Identifier: 158333338
GI number: 158333338
Start: 116437
End: 116952
Strand: Reverse
Name: 158333338
Synonym: AM1_0108
Alternate gene names: NA
Gene position: 116952-116437 (Counterclockwise)
Preceding gene: 158333345
Following gene: 158333333
Centisome position: 1.8
GC content: 46.51
Gene sequence:
>516_bases ATGGCTGTATTGGATTCCAAGGGACGCTTATTCGGTAAGGTCAACCTCTTAGATGCTGGGGCTGTCTTAATCATTTTGTC TGTTTTGGGGGGGATATTCTTATTCCCAGGACCGTCTGGCACCTTGGCCAATTCCGATGCCAATGTTGAGGTTGATTTGT TGGTTTTAGGATTGAAAACTCGAAATCCCAAAAAGATGATCAAGGCGGGAGAGAAGGCGAGTTTTAAAATCCGTAATCAG CCGATTGGTGAGGTCAAGATTAAGGAAGTAGAATTTCTGCCCAGAACCACGTTGGCTCCTCAAGCGGATGGATCTGTCAA AGCCGTTGCTGATCCTCGGGAAGAAGAGAAATTCTCAGTCAATATGATTGTCACCTTGGAAGGGAAGGGCCAAATGACGA GTAATGGTCCTGTCTTTGGCGGTACCTTAATCAAGGTTGGTCTACCTGTGGAACTAGATGGCGGACTGTACAATTTCAAA CCCAGCGTGATAGATATCCGAGTCCCAGAGGGATGA
Upstream 100 bases:
>100_bases ACAAGTCCAAAAGACGTGATAGTCTGTCAGCATCAAAAATTATGTGGGTTTATATACCGCTCTTTAGTTTCACCTGTAGA CGTCTAGGACTTATTTGCAA
Downstream 100 bases:
>100_bases GAAACCTTTACTCATAGCTAATTTTGGTCACTTTTGCTATTTTATTGAACTTCGCTAGTGGAAGATTCAACTTCTGCTAG TACTTGATCGGGTAAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAVLDSKGRLFGKVNLLDAGAVLIILSVLGGIFLFPGPSGTLANSDANVEVDLLVLGLKTRNPKKMIKAGEKASFKIRNQ PIGEVKIKEVEFLPRTTLAPQADGSVKAVADPREEEKFSVNMIVTLEGKGQMTSNGPVFGGTLIKVGLPVELDGGLYNFK PSVIDIRVPEG
Sequences:
>Translated_171_residues MAVLDSKGRLFGKVNLLDAGAVLIILSVLGGIFLFPGPSGTLANSDANVEVDLLVLGLKTRNPKKMIKAGEKASFKIRNQ PIGEVKIKEVEFLPRTTLAPQADGSVKAVADPREEEKFSVNMIVTLEGKGQMTSNGPVFGGTLIKVGLPVELDGGLYNFK PSVIDIRVPEG >Mature_170_residues AVLDSKGRLFGKVNLLDAGAVLIILSVLGGIFLFPGPSGTLANSDANVEVDLLVLGLKTRNPKKMIKAGEKASFKIRNQP IGEVKIKEVEFLPRTTLAPQADGSVKAVADPREEEKFSVNMIVTLEGKGQMTSNGPVFGGTLIKVGLPVELDGGLYNFKP SVIDIRVPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18157; Mature: 18025
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLDSKGRLFGKVNLLDAGAVLIILSVLGGIFLFPGPSGTLANSDANVEVDLLVLGLKT CCEECCCCCEEEEEEEECCCHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEEEECC RNPKKMIKAGEKASFKIRNQPIGEVKIKEVEFLPRTTLAPQADGSVKAVADPREEEKFSV CCHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEE NMIVTLEGKGQMTSNGPVFGGTLIKVGLPVELDGGLYNFKPSVIDIRVPEG EEEEEECCCCCCCCCCCEECCEEEEEECCEEECCCEEECCCCEEEEECCCC >Mature Secondary Structure AVLDSKGRLFGKVNLLDAGAVLIILSVLGGIFLFPGPSGTLANSDANVEVDLLVLGLKT CEECCCCCEEEEEEEECCCHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEEEEEECC RNPKKMIKAGEKASFKIRNQPIGEVKIKEVEFLPRTTLAPQADGSVKAVADPREEEKFSV CCHHHHHHCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEE NMIVTLEGKGQMTSNGPVFGGTLIKVGLPVELDGGLYNFKPSVIDIRVPEG EEEEEECCCCCCCCCCCEECCEEEEEECCEEECCCEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA