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The map label for this gene is 158333313

Identifier: 158333313

GI number: 158333313

Start: 88341

End: 89213

Strand: Direct

Name: 158333313

Synonym: AM1_0083

Alternate gene names: NA

Gene position: 88341-89213 (Clockwise)

Preceding gene: 158333312

Following gene: 158333314

Centisome position: 1.36

GC content: 45.82

Gene sequence:

>873_bases
ATGGCCTTTAATTTACCTAAACGTCAGACTTCGGGTTCTGTCGTCTGTTTTTCTTGTCAGAAACTGGTTTCTATTGAACA
AGAAGAATGCCCACAATGTGGTCAGGTGAATCCCGGCTTATGGGGATATGCACGTCCCATTCGCAGAGTAGGGGCCGATT
TTGGTTTTATCAAAATTGTGATCATCGGGTGTATTGCCCTTTATTTGATCACACTATTATTTGATCTTCCTGGCATTCGG
TCAGAAGGAGTTATGAACCTTTTAATGCCGAGTTCCTATAGTTTGCTAATTTTCGGCTCTACGGGTTCCGTTCCCATCTT
TGAATGGGGTCGATGGTGGACGGTACTTAGTTCGGGTTGGCTCCATGGGGGGCTGTGGCATTTAGGGTTCAATATGGCCT
GGTTAAACTATCTTTCACCAATGGTGGCAAAGGGGTATGGGGCGGGTCGATTAGTGAGTATCTATACATTCACAACCCTA
ACCAGCTCATTACTCACCAGTTTTGTCGCTCAGTATTGGACTTCTTTGCCACCATCGTTTAGGGGATCAAACTTCAGTGT
CGGTGCTTCTGGCGGCGTTTTTGGCCTTCTGGGAGCACTGGTGATTTATGGCCAACGGGCTCATAAACGACAGGTTTTGC
AACAAGCCCTGACGTTAACCATTATTTCGTTTGTACTGTCAGCCTTTGTTGGCAGAGTAGACAATTGGGGACATTTAGGC
GGATTTATAGGTGGGTATCTAATCGGACTAACCTCGTGGTTTAACCCCAATCAACCTCAGAGTCTTTACCATCTGGGAAT
TGCCATTGGCGCATTGGTGGTGACCTTTGTCAGTATCATTCTGTCTCCTGTTCATGCACTGTTGATTGGATAA

Upstream 100 bases:

>100_bases
AGCAAGGGACACCTCAATAGCTTGATTGGGCCAGGGGCAGTATTTGCACCAGGTTACAGTAGATCTATCCTGGATTTACT
CAACAGCCTTATGATCACCT

Downstream 100 bases:

>100_bases
ACCGTTTGTGCCAGAAAATTTAATTCGACAATTACCCTTTTAAAAAATTTTGACGATTTAGGTTTCTTGCTTCAAGTTGA
AAAAAAGAAAAAACATAAAT

Product: rhomboid family protein

Products: NA

Alternate protein names: Rhomboid-Like Membrane Protein; Rhomboid-Like Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAFNLPKRQTSGSVVCFSCQKLVSIEQEECPQCGQVNPGLWGYARPIRRVGADFGFIKIVIIGCIALYLITLLFDLPGIR
SEGVMNLLMPSSYSLLIFGSTGSVPIFEWGRWWTVLSSGWLHGGLWHLGFNMAWLNYLSPMVAKGYGAGRLVSIYTFTTL
TSSLLTSFVAQYWTSLPPSFRGSNFSVGASGGVFGLLGALVIYGQRAHKRQVLQQALTLTIISFVLSAFVGRVDNWGHLG
GFIGGYLIGLTSWFNPNQPQSLYHLGIAIGALVVTFVSIILSPVHALLIG

Sequences:

>Translated_290_residues
MAFNLPKRQTSGSVVCFSCQKLVSIEQEECPQCGQVNPGLWGYARPIRRVGADFGFIKIVIIGCIALYLITLLFDLPGIR
SEGVMNLLMPSSYSLLIFGSTGSVPIFEWGRWWTVLSSGWLHGGLWHLGFNMAWLNYLSPMVAKGYGAGRLVSIYTFTTL
TSSLLTSFVAQYWTSLPPSFRGSNFSVGASGGVFGLLGALVIYGQRAHKRQVLQQALTLTIISFVLSAFVGRVDNWGHLG
GFIGGYLIGLTSWFNPNQPQSLYHLGIAIGALVVTFVSIILSPVHALLIG
>Mature_289_residues
AFNLPKRQTSGSVVCFSCQKLVSIEQEECPQCGQVNPGLWGYARPIRRVGADFGFIKIVIIGCIALYLITLLFDLPGIRS
EGVMNLLMPSSYSLLIFGSTGSVPIFEWGRWWTVLSSGWLHGGLWHLGFNMAWLNYLSPMVAKGYGAGRLVSIYTFTTLT
SSLLTSFVAQYWTSLPPSFRGSNFSVGASGGVFGLLGALVIYGQRAHKRQVLQQALTLTIISFVLSAFVGRVDNWGHLGG
FIGGYLIGLTSWFNPNQPQSLYHLGIAIGALVVTFVSIILSPVHALLIG

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31560; Mature: 31429

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNLPKRQTSGSVVCFSCQKLVSIEQEECPQCGQVNPGLWGYARPIRRVGADFGFIKIV
CCCCCCCCCCCCCEEEEEHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
IIGCIALYLITLLFDLPGIRSEGVMNLLMPSSYSLLIFGSTGSVPIFEWGRWWTVLSSGW
HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHHHCCC
LHGGLWHLGFNMAWLNYLSPMVAKGYGAGRLVSIYTFTTLTSSLLTSFVAQYWTSLPPSF
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGSNFSVGASGGVFGLLGALVIYGQRAHKRQVLQQALTLTIISFVLSAFVGRVDNWGHLG
CCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GFIGGYLIGLTSWFNPNQPQSLYHLGIAIGALVVTFVSIILSPVHALLIG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFNLPKRQTSGSVVCFSCQKLVSIEQEECPQCGQVNPGLWGYARPIRRVGADFGFIKIV
CCCCCCCCCCCCEEEEEHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH
IIGCIALYLITLLFDLPGIRSEGVMNLLMPSSYSLLIFGSTGSVPIFEWGRWWTVLSSGW
HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHHHCCC
LHGGLWHLGFNMAWLNYLSPMVAKGYGAGRLVSIYTFTTLTSSLLTSFVAQYWTSLPPSF
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGSNFSVGASGGVFGLLGALVIYGQRAHKRQVLQQALTLTIISFVLSAFVGRVDNWGHLG
CCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GFIGGYLIGLTSWFNPNQPQSLYHLGIAIGALVVTFVSIILSPVHALLIG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA