| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158333284
Identifier: 158333284
GI number: 158333284
Start: 53429
End: 54646
Strand: Reverse
Name: 158333284
Synonym: AM1_0054
Alternate gene names: NA
Gene position: 54646-53429 (Counterclockwise)
Preceding gene: 158333285
Following gene: 158333282
Centisome position: 0.84
GC content: 48.77
Gene sequence:
>1218_bases ATGTTGCCCTCAGACCTATTGATGCACCGCTATCAGGGAGAAGCGCTTGTCCCGAAACGGTTGGCAATAAATGCAGGGAA TGTTGCGATCGCAACCGAAGCGATCGACTGCTTCAAATCGGCCTGCAATCAAACCCGAGGTGAATTAAATCAGCGGCTCC AAGATCTGGAAGGAGACGGAACGGATTACCGAGTGAAGCGAGGACTGGCCCATCTCTTATCCAGTGGCTTTTCCACCTTT GATGTCATTAGCCCTCTCGATCCACCCATGCTACGGCAACGGGTCTTTACCCTGTCGGCCCAGACCGTACCCAGTCCCCA AGCAACAACCCAAACCCTAGAACGACTAGCGGTTCACTTGAGCCAGGAGTTAGACCGAGACGTTAGCGCGATTCAGATCC GAGAAGGGCTGTATGCCGATCGACCCGACAATCAAATCTTGACAACCTTCGATGCCCCGACCCCGGAGGCGTTGCTCCAT CGCTATAACTTGTCTCAGGTTCAAGGCGTTTTTTACAAAGCCACTCAAATCATTATCAATGCCCATCGCAATGACCCCGG AGAATATAAGCTCCTATTTCGCTACCTGAAATTGTTTAGCCTGATGGCCTACATTGAGGGCGATGCGGATCAAGGGTTTA CCCTCAAGATCGATGGCCCCGCCAGTGTGTTTAGCGCCAGTACCCGTTATGGCTTAGCTTTGGCTAAGTTGTTGCCCGCG CTATTGCATGTCACAAAATGGAGCTTAACCGCAACCTTAACCAACAAAGACACCTATTCCAAAAAACAGCGAACCAGTCG ATTTGCCCTAGATTCTGAATGTGGTTTGGTCAGTCACTATCCACCGGGTAAACCCTATGACAGTATGCTCGAAGCCAGCT TTGCTGAACGTTGGCAGAAAACCAAAACGGACTGGAAACTAGAACGAGAAATTGATCTGATTCCCATTCCAGGAAGTGTC ATGATTCCAGACTTTCGCCTTGTTCACCCGGATGGTCGGACGTTCCTTTTAGAAATAGTGGGATATTGGCGACCTGAGTA TTTGAAAAAGAAGTTTTCTCAGGTTCGACAGGCGGATCGATCAGACCTAATTTTAGCGATTTCAGAACGGCTCAATCTGG ATAAAGCAGGCGTCAATTTTAATAATACGCCCGCTCGATTAATCTGGTTCAAAGATAAGCTTGTACCTAAAGCGGTACTG CAAGTTTTAGAGGATTAG
Upstream 100 bases:
>100_bases TCTATCCAACAACCCCCTTCGATCAGAGCTAGAAGTGCTTTGGGAACGGGGACCTAACGCCATCAAAAGCTATCTGCAAA ATAGCGCGAAGGGGTAAGAC
Downstream 100 bases:
>100_bases GCTAAGCCAGTCTTATGCCATACCTTTTAACGCTTTGACCTGATCAACGAAGTCTTTGGGGTGATCTGGGGTAATGACAA TCACCTTTTGATCGAACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLPSDLLMHRYQGEALVPKRLAINAGNVAIATEAIDCFKSACNQTRGELNQRLQDLEGDGTDYRVKRGLAHLLSSGFSTF DVISPLDPPMLRQRVFTLSAQTVPSPQATTQTLERLAVHLSQELDRDVSAIQIREGLYADRPDNQILTTFDAPTPEALLH RYNLSQVQGVFYKATQIIINAHRNDPGEYKLLFRYLKLFSLMAYIEGDADQGFTLKIDGPASVFSASTRYGLALAKLLPA LLHVTKWSLTATLTNKDTYSKKQRTSRFALDSECGLVSHYPPGKPYDSMLEASFAERWQKTKTDWKLEREIDLIPIPGSV MIPDFRLVHPDGRTFLLEIVGYWRPEYLKKKFSQVRQADRSDLILAISERLNLDKAGVNFNNTPARLIWFKDKLVPKAVL QVLED
Sequences:
>Translated_405_residues MLPSDLLMHRYQGEALVPKRLAINAGNVAIATEAIDCFKSACNQTRGELNQRLQDLEGDGTDYRVKRGLAHLLSSGFSTF DVISPLDPPMLRQRVFTLSAQTVPSPQATTQTLERLAVHLSQELDRDVSAIQIREGLYADRPDNQILTTFDAPTPEALLH RYNLSQVQGVFYKATQIIINAHRNDPGEYKLLFRYLKLFSLMAYIEGDADQGFTLKIDGPASVFSASTRYGLALAKLLPA LLHVTKWSLTATLTNKDTYSKKQRTSRFALDSECGLVSHYPPGKPYDSMLEASFAERWQKTKTDWKLEREIDLIPIPGSV MIPDFRLVHPDGRTFLLEIVGYWRPEYLKKKFSQVRQADRSDLILAISERLNLDKAGVNFNNTPARLIWFKDKLVPKAVL QVLED >Mature_405_residues MLPSDLLMHRYQGEALVPKRLAINAGNVAIATEAIDCFKSACNQTRGELNQRLQDLEGDGTDYRVKRGLAHLLSSGFSTF DVISPLDPPMLRQRVFTLSAQTVPSPQATTQTLERLAVHLSQELDRDVSAIQIREGLYADRPDNQILTTFDAPTPEALLH RYNLSQVQGVFYKATQIIINAHRNDPGEYKLLFRYLKLFSLMAYIEGDADQGFTLKIDGPASVFSASTRYGLALAKLLPA LLHVTKWSLTATLTNKDTYSKKQRTSRFALDSECGLVSHYPPGKPYDSMLEASFAERWQKTKTDWKLEREIDLIPIPGSV MIPDFRLVHPDGRTFLLEIVGYWRPEYLKKKFSQVRQADRSDLILAISERLNLDKAGVNFNNTPARLIWFKDKLVPKAVL QVLED
Specific function: Unknown
COG id: COG3372
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45784; Mature: 45784
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSDLLMHRYQGEALVPKRLAINAGNVAIATEAIDCFKSACNQTRGELNQRLQDLEGDG CCCHHHHHHHHCCCCCCCHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TDYRVKRGLAHLLSSGFSTFDVISPLDPPMLRQRVFTLSAQTVPSPQATTQTLERLAVHL CHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SQELDRDVSAIQIREGLYADRPDNQILTTFDAPTPEALLHRYNLSQVQGVFYKATQIIIN HHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHEEEEEE AHRNDPGEYKLLFRYLKLFSLMAYIEGDADQGFTLKIDGPASVFSASTRYGLALAKLLPA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHH LLHVTKWSLTATLTNKDTYSKKQRTSRFALDSECGLVSHYPPGKPYDSMLEASFAERWQK HHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TKTDWKLEREIDLIPIPGSVMIPDFRLVHPDGRTFLLEIVGYWRPEYLKKKFSQVRQADR CCCCCEEECCEEEEECCCCEECCCEEEECCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCC SDLILAISERLNLDKAGVNFNNTPARLIWFKDKLVPKAVLQVLED CCEEEEEHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHCC >Mature Secondary Structure MLPSDLLMHRYQGEALVPKRLAINAGNVAIATEAIDCFKSACNQTRGELNQRLQDLEGDG CCCHHHHHHHHCCCCCCCHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TDYRVKRGLAHLLSSGFSTFDVISPLDPPMLRQRVFTLSAQTVPSPQATTQTLERLAVHL CHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH SQELDRDVSAIQIREGLYADRPDNQILTTFDAPTPEALLHRYNLSQVQGVFYKATQIIIN HHHHCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHEEEEEE AHRNDPGEYKLLFRYLKLFSLMAYIEGDADQGFTLKIDGPASVFSASTRYGLALAKLLPA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHH LLHVTKWSLTATLTNKDTYSKKQRTSRFALDSECGLVSHYPPGKPYDSMLEASFAERWQK HHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TKTDWKLEREIDLIPIPGSVMIPDFRLVHPDGRTFLLEIVGYWRPEYLKKKFSQVRQADR CCCCCEEECCEEEEECCCCEECCCEEEECCCCCEEHHHHHHHCCHHHHHHHHHHHHHCCC SDLILAISERLNLDKAGVNFNNTPARLIWFKDKLVPKAVLQVLED CCEEEEEHHHCCCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA