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The map label for this gene is nudF [H]

Identifier: 158333234

GI number: 158333234

Start: 1627

End: 2319

Strand: Reverse

Name: nudF [H]

Synonym: AM1_0003

Alternate gene names: 158333234

Gene position: 2319-1627 (Counterclockwise)

Preceding gene: 158333240

Following gene: NA

Centisome position: 0.04

GC content: 47.76

Gene sequence:

>693_bases
ATGCCCTATACCTATGATTATCCGCGCCCTGGTCTTACCGTTGACTGCGTGGTGTTTGGCCTAGACGAACAGATCGATCT
CAAAGTCCTACTGATTCAGCGCCAGATTCCCCCTTTCCAGCATCAGTGGGCATTACCCGGAGGCTTTGTGCAGATGGATG
AATCTTTAGAAGACGCGGCTCGCCGGGAGCTGCGAGAAGAAACGGGGGTTCAGGGTATTTTCCTAGAGCAGCTCTATACC
TTTGGCGATTTGGGTCGAGATCCGCGCGATCGCATCATCTCCGTTGCCTACTACGCTCTAATCAACCTCATCGAATATCC
TTTACAAGCCTCTACTGATGCTGAAGACGCAGCCTGGTACTCCATTGAGAATTTGCCATCTCTAGCTTTTGATCATGCTC
AAATCTTGAAACAGGCCATCCGGCGATTGCAGGGCAAAGTTCGCTACGAACCGATTGGCTTCGAACTACTGCCGCAAAAA
TTTACACTCACCCAAATTCAGCAGCTTTACGAAACAGTTCTTGGCCATCCTCTAGATAAACGGAACTTTCGTAAGAAATT
GCTAAAAATGGATCTCTTAATTCCCCTTGATGAGCAACAAACTGGAGTTGCTCATCGTGCTGCCAGACTCTATCAGTTCG
ACCAAAGCAAATACGAGCTATTGAAACAACAGGGATTTAACTTCGAGGTTTGA

Upstream 100 bases:

>100_bases
CAAAATGCTGTTGCATTGCTCTATAGTGTAAAAACGACACTAACTTGAATAAAACCATCATAGTGTCGTTTTTACACGAT
GTCAAGATTGCCCCTATCCT

Downstream 100 bases:

>100_bases
GATTAAAGCTTTTGAAAAGTAGGGCTGTGTAGCAGCCGATATATCTTGCAGTGCGATATCCGCAAATACTTCCCCTCCAT
CGATCTAGACATCCTCAAAA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MPYTYDYPRPGLTVDCVVFGLDEQIDLKVLLIQRQIPPFQHQWALPGGFVQMDESLEDAARRELREETGVQGIFLEQLYT
FGDLGRDPRDRIISVAYYALINLIEYPLQASTDAEDAAWYSIENLPSLAFDHAQILKQAIRRLQGKVRYEPIGFELLPQK
FTLTQIQQLYETVLGHPLDKRNFRKKLLKMDLLIPLDEQQTGVAHRAARLYQFDQSKYELLKQQGFNFEV

Sequences:

>Translated_230_residues
MPYTYDYPRPGLTVDCVVFGLDEQIDLKVLLIQRQIPPFQHQWALPGGFVQMDESLEDAARRELREETGVQGIFLEQLYT
FGDLGRDPRDRIISVAYYALINLIEYPLQASTDAEDAAWYSIENLPSLAFDHAQILKQAIRRLQGKVRYEPIGFELLPQK
FTLTQIQQLYETVLGHPLDKRNFRKKLLKMDLLIPLDEQQTGVAHRAARLYQFDQSKYELLKQQGFNFEV
>Mature_229_residues
PYTYDYPRPGLTVDCVVFGLDEQIDLKVLLIQRQIPPFQHQWALPGGFVQMDESLEDAARRELREETGVQGIFLEQLYTF
GDLGRDPRDRIISVAYYALINLIEYPLQASTDAEDAAWYSIENLPSLAFDHAQILKQAIRRLQGKVRYEPIGFELLPQKF
TLTQIQQLYETVLGHPLDKRNFRKKLLKMDLLIPLDEQQTGVAHRAARLYQFDQSKYELLKQQGFNFEV

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 26766; Mature: 26635

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYTYDYPRPGLTVDCVVFGLDEQIDLKVLLIQRQIPPFQHQWALPGGFVQMDESLEDAA
CCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
RRELREETGVQGIFLEQLYTFGDLGRDPRDRIISVAYYALINLIEYPLQASTDAEDAAWY
HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SIENLPSLAFDHAQILKQAIRRLQGKVRYEPIGFELLPQKFTLTQIQQLYETVLGHPLDK
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCH
RNFRKKLLKMDLLIPLDEQQTGVAHRAARLYQFDQSKYELLKQQGFNFEV
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PYTYDYPRPGLTVDCVVFGLDEQIDLKVLLIQRQIPPFQHQWALPGGFVQMDESLEDAA
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
RRELREETGVQGIFLEQLYTFGDLGRDPRDRIISVAYYALINLIEYPLQASTDAEDAAWY
HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
SIENLPSLAFDHAQILKQAIRRLQGKVRYEPIGFELLPQKFTLTQIQQLYETVLGHPLDK
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCH
RNFRKKLLKMDLLIPLDEQQTGVAHRAARLYQFDQSKYELLKQQGFNFEV
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]