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The map label for this gene is rnpA

Identifier: 158319057

GI number: 158319057

Start: 8980471

End: 8980836

Strand: Reverse

Name: rnpA

Synonym: Franean1_7340

Alternate gene names: 158319057

Gene position: 8980836-8980471 (Counterclockwise)

Preceding gene: 158319058

Following gene: 158319056

Centisome position: 99.99

GC content: 70.77

Gene sequence:

>366_bases
ATGCTCCCCCGGGGCTCCCGAGTTCGTACCAGGCAGGAACACGCCCTTGTCGGGCGCTCCGGCCGGCGCGTTCGGGCAGG
GTCAATCGTTGTCCACAGTGTGCAAACCGATGTGGACGGCCCGCCTCGAGCCGGGTTCGTCGTCGGCCGCCGGGTGGGTA
ACGCGGTGGTGCGTAACCGCGTCCGCAGGCGGCTGCGCGAGCAGACGCGCTCACGGCTGTCCTCGCTGCCACCGGGAACC
GCTGTCCTGATCAGGGCGTTACCCGATGCGGCGGGTTCGTCGTCGGCCGATCTCGGCCGTTCACTCGACTCCGCCTTTCG
TACCGTCCGCTCCCCGCGCCCCCAGCGATCGGCGCGGTCGGGATGA

Upstream 100 bases:

>100_bases
GGACCCGCGCGGGCCGCTCCATCCTGTCCGCCCGTCGCAGTAAGGGCCGCAGCCAGCTCTCCGCCTGACGGCGGAGTGAG
CGCGCCCGCCGCCGTCAGTC

Downstream 100 bases:

>100_bases
GCGCGGTCGCCGGCGTGGGCATCGCGGTCGCCGTCTTGGCGTTCGTCGACCTTGTTCTCGTCGCGATCGCGACGTCCGTC
AGGTTCGCCACGCTGGCCAG

Product: ribonuclease P protein component

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLPRGSRVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNRVRRRLREQTRSRLSSLPPGT
AVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARSG

Sequences:

>Translated_121_residues
MLPRGSRVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNRVRRRLREQTRSRLSSLPPGT
AVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARSG
>Mature_121_residues
MLPRGSRVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNRVRRRLREQTRSRLSSLPPGT
AVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARSG

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNPA_FRASN (A8L8W2)

Other databases:

- EMBL:   CP000820
- RefSeq:   YP_001511565.1
- ProteinModelPortal:   A8L8W2
- SMR:   A8L8W2
- GeneID:   5675641
- GenomeReviews:   CP000820_GR
- KEGG:   fre:Franean1_7340
- HOGENOM:   HBG728160
- OMA:   RETRQEG
- BioCyc:   FSP1855:FRANEAN1_7340-MONOMER
- HAMAP:   MF_00227
- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- InterPro:   IPR020539
- Gene3D:   G3DSA:3.30.230.10
- TIGRFAMs:   TIGR00188

Pfam domain/function: PF00825 Ribonuclease_P; SSF54211 Ribosomal_S5_D2-typ_fold

EC number: =3.1.26.5

Molecular weight: Translated: 13140; Mature: 13140

Theoretical pI: Translated: 12.85; Mature: 12.85

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPRGSRVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNR
CCCCCCCCHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VRRRLREQTRSRLSSLPPGTAVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARS
HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
G
C
>Mature Secondary Structure
MLPRGSRVRTRQEHALVGRSGRRVRAGSIVVHSVQTDVDGPPRAGFVVGRRVGNAVVRNR
CCCCCCCCHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
VRRRLREQTRSRLSSLPPGTAVLIRALPDAAGSSSADLGRSLDSAFRTVRSPRPQRSARS
HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA