| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is soj [H]
Identifier: 158319050
GI number: 158319050
Start: 8969253
End: 8970665
Strand: Reverse
Name: soj [H]
Synonym: Franean1_7333
Alternate gene names: 158319050
Gene position: 8970665-8969253 (Counterclockwise)
Preceding gene: 158319051
Following gene: 158319049
Centisome position: 99.87
GC content: 71.27
Gene sequence:
>1413_bases GTGATCGACCGGCACGTGGGAGGTCCCGTTCCACGTGAAACAGCGATGCCATATCGGACGGCGAGGGCACCTGAAGCAGC GTCGGCGGGTCGAGGTGGCCTGGCACACGGGGGGAGTCCGGGTGACACGTCCGGCCTCCCGGGCCTGGACCCCCTTGACT CCTCGACCCCGATCGGAGCGGCGGCGGCAGCAGCGGTGGAAGCACTGACGATGGAACGACGACGACCCTTTCCTCGACCC AGCCGGCGACGTGTCATCACCGTCGCCAACCAGAAGGGTGGCGTCGGCAAGACGACGACCACCGTCAACCTGGCCGCCGC ACTGGCCATGCACGGAGTCCGTGTACTGGTCGTGGACCTGGACCCGCAGGGGAACGCCTCCACGGCGCTCGGTGTGGACC ACCGGTCCGGCACTCCCTCGATCTACGAGGTACTGCTAGGTGACCGCCCACTCGACGAGGTCGTCGTGCGGTCCAGCGAG TCCAGCGGGCTGTTCTGCGCACCGGCGACGATCGACCTCGCGGGTGCCGAGATCGAGCTGGTCTCGATGGTCGCGCGGGA GACCCGCCTGCGTCGGGCCATCGACGGCATGCGGAACGAGGTCGACTACGTCCTCATCGACTGCCCGCCGTCGCTGGGGC TGCTCACGGTCAACGCGCTTGTGGCGGCCCGGGAGCTCCTGATCCCGATCCAGTGTGAGTACTACGCGCTGGAGGGCCTT GGTCAGCTGCTGCGTAACGTCGAGCTGGTCCAGGCCCATCTCAATCAGGAGCTCCGGCTGTCGACCATCCTGCTGACCAT GTACGACTCGCGCACCCGGCTCGCCGATCAGGTCGTGCACGAGGTGAAGGAGCATTTCGGGGACAGGGTGCTGAGTACCA CGATCCCGCGCAACGTCCGGCTGGCCGAGGCGCCGAGCTACGGTCAGTCCGTCCTGACCTACGATCCCGCCTCCCGCGGG TCGCTGTCCTACCTGGCCGCTGCTCGCGAGCTCGCCGAGCGCGGAGTCGACCCGGCTCCACGTGGCACCGCCGGGAGCGC CCGCGATGGGGCTCCCATCGGCCCCATCCCGACCGGTGGGGCTCCGGTGAACGGCCACTCCCCCGCAGGGCACGCGCCGC CCACCGGCCGCGGCACGGGCGCCGTCCAGGCCGGCCCTGACCGGCACGGCCCGCCGTCCGGCTACGGCGCAGACGACGAC CGGTACGGCACGCCCGCCGACGGCTACGACTCGCCGGGCGGTCACGCCGCTCCGGCCGGGGCGTCCACGCCGGACGGCTT CGCCGTTCCGGACGGGCCGATGATCCCGGGTGCACCCAGCACCCGGGACGGGTACGGACGGCCCAACGGCCACGGCCCGC ACGGCGGTGCCGCGGGTCCTGGCGATCCGAACCTGAACGGGGCCGGTCGATGA
Upstream 100 bases:
>100_bases CCTCAGGCGACCCAAGGGGACGGCGGGAGGGGACGGCGCGGCGCGGATGACCGGCAGGCCAGATGGACGACACAGCCACG GCGACCACGGGAGGGCACTC
Downstream 100 bases:
>100_bases CGGCGCGGCGTGGTGGTCTGGGCCGTGGTCTCGGCGCGCTCATTCCGGCGGCCGCCGAGCCGCAGGACGGCTACCAGAGC AACGGCCTGGACCATGCTCC
Product: cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MIDRHVGGPVPRETAMPYRTARAPEAASAGRGGLAHGGSPGDTSGLPGLDPLDSSTPIGAAAAAAVEALTMERRRPFPRP SRRRVITVANQKGGVGKTTTTVNLAAALAMHGVRVLVVDLDPQGNASTALGVDHRSGTPSIYEVLLGDRPLDEVVVRSSE SSGLFCAPATIDLAGAEIELVSMVARETRLRRAIDGMRNEVDYVLIDCPPSLGLLTVNALVAARELLIPIQCEYYALEGL GQLLRNVELVQAHLNQELRLSTILLTMYDSRTRLADQVVHEVKEHFGDRVLSTTIPRNVRLAEAPSYGQSVLTYDPASRG SLSYLAAARELAERGVDPAPRGTAGSARDGAPIGPIPTGGAPVNGHSPAGHAPPTGRGTGAVQAGPDRHGPPSGYGADDD RYGTPADGYDSPGGHAAPAGASTPDGFAVPDGPMIPGAPSTRDGYGRPNGHGPHGGAAGPGDPNLNGAGR
Sequences:
>Translated_470_residues MIDRHVGGPVPRETAMPYRTARAPEAASAGRGGLAHGGSPGDTSGLPGLDPLDSSTPIGAAAAAAVEALTMERRRPFPRP SRRRVITVANQKGGVGKTTTTVNLAAALAMHGVRVLVVDLDPQGNASTALGVDHRSGTPSIYEVLLGDRPLDEVVVRSSE SSGLFCAPATIDLAGAEIELVSMVARETRLRRAIDGMRNEVDYVLIDCPPSLGLLTVNALVAARELLIPIQCEYYALEGL GQLLRNVELVQAHLNQELRLSTILLTMYDSRTRLADQVVHEVKEHFGDRVLSTTIPRNVRLAEAPSYGQSVLTYDPASRG SLSYLAAARELAERGVDPAPRGTAGSARDGAPIGPIPTGGAPVNGHSPAGHAPPTGRGTGAVQAGPDRHGPPSGYGADDD RYGTPADGYDSPGGHAAPAGASTPDGFAVPDGPMIPGAPSTRDGYGRPNGHGPHGGAAGPGDPNLNGAGR >Mature_470_residues MIDRHVGGPVPRETAMPYRTARAPEAASAGRGGLAHGGSPGDTSGLPGLDPLDSSTPIGAAAAAAVEALTMERRRPFPRP SRRRVITVANQKGGVGKTTTTVNLAAALAMHGVRVLVVDLDPQGNASTALGVDHRSGTPSIYEVLLGDRPLDEVVVRSSE SSGLFCAPATIDLAGAEIELVSMVARETRLRRAIDGMRNEVDYVLIDCPPSLGLLTVNALVAARELLIPIQCEYYALEGL GQLLRNVELVQAHLNQELRLSTILLTMYDSRTRLADQVVHEVKEHFGDRVLSTTIPRNVRLAEAPSYGQSVLTYDPASRG SLSYLAAARELAERGVDPAPRGTAGSARDGAPIGPIPTGGAPVNGHSPAGHAPPTGRGTGAVQAGPDRHGPPSGYGADDD RYGTPADGYDSPGGHAAPAGASTPDGFAVPDGPMIPGAPSTRDGYGRPNGHGPHGGAAGPGDPNLNGAGR
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 48423; Mature: 48423
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDRHVGGPVPRETAMPYRTARAPEAASAGRGGLAHGGSPGDTSGLPGLDPLDSSTPIGA CCCCCCCCCCCCHHCCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AAAAAVEALTMERRRPFPRPSRRRVITVANQKGGVGKTTTTVNLAAALAMHGVRVLVVDL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEEE DPQGNASTALGVDHRSGTPSIYEVLLGDRPLDEVVVRSSESSGLFCAPATIDLAGAEIEL CCCCCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCEEECCCCHHHH VSMVARETRLRRAIDGMRNEVDYVLIDCPPSLGLLTVNALVAARELLIPIQCEYYALEGL HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHH GQLLRNVELVQAHLNQELRLSTILLTMYDSRTRLADQVVHEVKEHFGDRVLSTTIPRNVR HHHHHHHHHHHHHHCCHHEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEE LAEAPSYGQSVLTYDPASRGSLSYLAAARELAERGVDPAPRGTAGSARDGAPIGPIPTGG EECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC APVNGHSPAGHAPPTGRGTGAVQAGPDRHGPPSGYGADDDRYGTPADGYDSPGGHAAPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTPDGFAVPDGPMIPGAPSTRDGYGRPNGHGPHGGAAGPGDPNLNGAGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDRHVGGPVPRETAMPYRTARAPEAASAGRGGLAHGGSPGDTSGLPGLDPLDSSTPIGA CCCCCCCCCCCCHHCCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AAAAAVEALTMERRRPFPRPSRRRVITVANQKGGVGKTTTTVNLAAALAMHGVRVLVVDL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEEEE DPQGNASTALGVDHRSGTPSIYEVLLGDRPLDEVVVRSSESSGLFCAPATIDLAGAEIEL CCCCCCCCEEECCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCEEEECCEEECCCCHHHH VSMVARETRLRRAIDGMRNEVDYVLIDCPPSLGLLTVNALVAARELLIPIQCEYYALEGL HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHH GQLLRNVELVQAHLNQELRLSTILLTMYDSRTRLADQVVHEVKEHFGDRVLSTTIPRNVR HHHHHHHHHHHHHHCCHHEEEEEEEEHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCEE LAEAPSYGQSVLTYDPASRGSLSYLAAARELAERGVDPAPRGTAGSARDGAPIGPIPTGG EECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC APVNGHSPAGHAPPTGRGTGAVQAGPDRHGPPSGYGADDDRYGTPADGYDSPGGHAAPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASTPDGFAVPDGPMIPGAPSTRDGYGRPNGHGPHGGAAGPGDPNLNGAGR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]