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The map label for this gene is ssb [H]

Identifier: 158319028

GI number: 158319028

Start: 8935179

End: 8935760

Strand: Reverse

Name: ssb [H]

Synonym: Franean1_7311

Alternate gene names: 158319028

Gene position: 8935760-8935179 (Counterclockwise)

Preceding gene: 158319029

Following gene: 158319027

Centisome position: 99.48

GC content: 69.76

Gene sequence:

>582_bases
ATGGCCGGTGAGACGGTGATCACGGTTGTCGGCAATCTGACCAACGACCCCGAACTGCGTTTCACGCCGAACGGCGCCGC
GGTCGCGAGCTTCACGGTCGCGTCAACCCCGCGCACGCTCGACCGCGGAACGAACGAGTGGAAGGACGGCGAGGCGCTCT
TCCTTCGCTGTTCCATCTGGCGGCAGGCTGCCGAGCATGTCGCCGAGTCCCTTACCAAGGGCGCGCGCGTCATCATCCAG
GGGCGCCTCAAGCAGCGCTCCTTCGAGACCCGCGAGGGTGAGAAGCGCACGGTGATTGAACTGGACGTCGACGAGATCGG
TCCCTCGCTGCGTTACGCGACCACGAAGGTCACCAAGGCCGCCCGCGGTGGCGGTTTCGGTGGTGGCCAGCCTGGTGGCG
GCTTCGGTGGCGGCCAGGGTGGCCCCGGCGGCCCGAGCGGGCCTGGTGGCACCGGTGGTCAGCCTGGTGGCGGCTACAAC
GGCGGATCCCCGCAGGGCGGTGGCTCCGGCTATGCCGGCGGCGCCGTCGACGACCCGTGGTCACAGCCCGCGGGTGGTTA
CTCCGACGAGCCGCCGTTCTGA

Upstream 100 bases:

>100_bases
CAAGGCTCCGCGGCCGAACCGCCGGGCGGCGGCGTGACGTGCTCCGCCCGGTCGGCGCTGCGTGCGTTGACGCGGGCCCC
TCGACCGGAGGAGCGTGATC

Downstream 100 bases:

>100_bases
GCGGCCGCGTGTCATCTTCGCGCGACCGGAACTCGGGCGCAAAACGAGGTAGGAGCACATCCATGGCCAAGGCGGCCGTG
CGCAAGCCCAAGAAGAAGGT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAGETVITVVGNLTNDPELRFTPNGAAVASFTVASTPRTLDRGTNEWKDGEALFLRCSIWRQAAEHVAESLTKGARVIIQ
GRLKQRSFETREGEKRTVIELDVDEIGPSLRYATTKVTKAARGGGFGGGQPGGGFGGGQGGPGGPSGPGGTGGQPGGGYN
GGSPQGGGSGYAGGAVDDPWSQPAGGYSDEPPF

Sequences:

>Translated_193_residues
MAGETVITVVGNLTNDPELRFTPNGAAVASFTVASTPRTLDRGTNEWKDGEALFLRCSIWRQAAEHVAESLTKGARVIIQ
GRLKQRSFETREGEKRTVIELDVDEIGPSLRYATTKVTKAARGGGFGGGQPGGGFGGGQGGPGGPSGPGGTGGQPGGGYN
GGSPQGGGSGYAGGAVDDPWSQPAGGYSDEPPF
>Mature_192_residues
AGETVITVVGNLTNDPELRFTPNGAAVASFTVASTPRTLDRGTNEWKDGEALFLRCSIWRQAAEHVAESLTKGARVIIQG
RLKQRSFETREGEKRTVIELDVDEIGPSLRYATTKVTKAARGGGFGGGQPGGGFGGGQGGPGGPSGPGGTGGQPGGGYNG
GSPQGGGSGYAGGAVDDPWSQPAGGYSDEPPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair. Interacts with recA [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=187, Percent_Identity=32.620320855615, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19553; Mature: 19421

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGETVITVVGNLTNDPELRFTPNGAAVASFTVASTPRTLDRGTNEWKDGEALFLRCSIW
CCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCHHHHCCCCCCCCCCEEEEEHHHH
RQAAEHVAESLTKGARVIIQGRLKQRSFETREGEKRTVIELDVDEIGPSLRYATTKVTKA
HHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHH
ARGGGFGGGQPGGGFGGGQGGPGGPSGPGGTGGQPGGGYNGGSPQGGGSGYAGGAVDDPW
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQPAGGYSDEPPF
CCCCCCCCCCCCC
>Mature Secondary Structure 
AGETVITVVGNLTNDPELRFTPNGAAVASFTVASTPRTLDRGTNEWKDGEALFLRCSIW
CCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCHHHHCCCCCCCCCCEEEEEHHHH
RQAAEHVAESLTKGARVIIQGRLKQRSFETREGEKRTVIELDVDEIGPSLRYATTKVTKA
HHHHHHHHHHHHCCCEEEEECHHHHHCCCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHH
ARGGGFGGGQPGGGFGGGQGGPGGPSGPGGTGGQPGGGYNGGSPQGGGSGYAGGAVDDPW
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQPAGGYSDEPPF
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11577073 [H]