| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is bglA [H]
Identifier: 158319021
GI number: 158319021
Start: 8926196
End: 8926981
Strand: Reverse
Name: bglA [H]
Synonym: Franean1_7304
Alternate gene names: 158319021
Gene position: 8926981-8926196 (Counterclockwise)
Preceding gene: 158319022
Following gene: 158319016
Centisome position: 99.39
GC content: 73.16
Gene sequence:
>786_bases ATGACGCCCTCGAAGAGCGCCTCGACCAGCTCCGCACCGGTCTCCGGGGGCGACGACGGCGCGGGCCTGCTGTGGTCGGA CGAGTTCGGCGGCGCGGCGGGCGCGGCCCCGGACCCGGACACCTGGATCGCCCAGACCGGCTCCGGCTGGGGCGACCGGG AGATGCAGTGCTACACCCGCGACCCGCGGAACCTGGCGACCGACGGCCGCGGCCACCTCGTGATCACCGCGCGCAGGGAG CCGTCCTGCGACGGCGCGCGCTTCTCCTCCGCGCGAATCGAGACGCTCGGCAGGCGAACCATGCGCTACGGCTACCTGGA GACCCGGGCCGTGCTGCCGACCGGCCGCGGCGCCTTCCCGGCGGTGTGGCTCCTCGGCTCCGACATGCCGGCCGTCGGCT GGCCGGCGAGCGGCGAGCTGGACGTCGTCGAGGCGGTCTCGACGGCGCCCACGACCGTGCACACGAATGTCCACGGCGTG GACACCGCCGGCGTTCACTGGCAGGCCACCTGGGGCAACGGCGGGATGTACGACGCCGGGGCCGACCTCGCGGCGGCCTT CCACACCTACGGCCTGGAGTGGACGCCGTCCGCGCTGCGGTTCTACTTCGACGGCCGGCTCATCCGCACCGTCACCCGTG ATCAGGTGCCGGTCTGGCTGTGGGACCGGGAGCACTACGTGATCCTCAACGTCGCGGTGAACTTGGAGGGCGCGAGTGCC ACGGCCGCTGACTACCCGCAGCGGATGGCGGTCGACTACCTGCGGGTCTACGTCGCCAAGCCGTGA
Upstream 100 bases:
>100_bases GCGGGAGCCCCAGATCCCGGGATCAGGCGTGGCAGGCGCGGTGCCCGCGGCGCCGGGGGGCGCGGCCACCAGCACGCCCC AGCCCGCCGTCGAGTGGGCG
Downstream 100 bases:
>100_bases TACTCCGACTGCCCTGGCACCCCAGCCGCCCTGATGCCACCGCGCAGGCTCCGGCCGCCGCGCCCCGGCCCGGTCGGCCC GGTCGGATCAGGAGGGGACG
Product: glucan endo-1,3-beta-D-glucosidase
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTPSKSASTSSAPVSGGDDGAGLLWSDEFGGAAGAAPDPDTWIAQTGSGWGDREMQCYTRDPRNLATDGRGHLVITARRE PSCDGARFSSARIETLGRRTMRYGYLETRAVLPTGRGAFPAVWLLGSDMPAVGWPASGELDVVEAVSTAPTTVHTNVHGV DTAGVHWQATWGNGGMYDAGADLAAAFHTYGLEWTPSALRFYFDGRLIRTVTRDQVPVWLWDREHYVILNVAVNLEGASA TAADYPQRMAVDYLRVYVAKP
Sequences:
>Translated_261_residues MTPSKSASTSSAPVSGGDDGAGLLWSDEFGGAAGAAPDPDTWIAQTGSGWGDREMQCYTRDPRNLATDGRGHLVITARRE PSCDGARFSSARIETLGRRTMRYGYLETRAVLPTGRGAFPAVWLLGSDMPAVGWPASGELDVVEAVSTAPTTVHTNVHGV DTAGVHWQATWGNGGMYDAGADLAAAFHTYGLEWTPSALRFYFDGRLIRTVTRDQVPVWLWDREHYVILNVAVNLEGASA TAADYPQRMAVDYLRVYVAKP >Mature_260_residues TPSKSASTSSAPVSGGDDGAGLLWSDEFGGAAGAAPDPDTWIAQTGSGWGDREMQCYTRDPRNLATDGRGHLVITARREP SCDGARFSSARIETLGRRTMRYGYLETRAVLPTGRGAFPAVWLLGSDMPAVGWPASGELDVVEAVSTAPTTVHTNVHGVD TAGVHWQATWGNGGMYDAGADLAAAFHTYGLEWTPSALRFYFDGRLIRTVTRDQVPVWLWDREHYVILNVAVNLEGASAT AADYPQRMAVDYLRVYVAKP
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 28110; Mature: 27979
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSKSASTSSAPVSGGDDGAGLLWSDEFGGAAGAAPDPDTWIAQTGSGWGDREMQCYTR CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC DPRNLATDGRGHLVITARREPSCDGARFSSARIETLGRRTMRYGYLETRAVLPTGRGAFP CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC AVWLLGSDMPAVGWPASGELDVVEAVSTAPTTVHTNVHGVDTAGVHWQATWGNGGMYDAG EEEEECCCCCCCCCCCCCCEEHEEHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCC ADLAAAFHTYGLEWTPSALRFYFDGRLIRTVTRDQVPVWLWDREHYVILNVAVNLEGASA CHHHHHHHHCCCEECHHHEEEEECCEEEEEECCCCCEEEEECCCCEEEEEEEEEECCCCC TAADYPQRMAVDYLRVYVAKP CHHCCHHHHHHHEEEEEEECC >Mature Secondary Structure TPSKSASTSSAPVSGGDDGAGLLWSDEFGGAAGAAPDPDTWIAQTGSGWGDREMQCYTR CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEC DPRNLATDGRGHLVITARREPSCDGARFSSARIETLGRRTMRYGYLETRAVLPTGRGAFP CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC AVWLLGSDMPAVGWPASGELDVVEAVSTAPTTVHTNVHGVDTAGVHWQATWGNGGMYDAG EEEEECCCCCCCCCCCCCCEEHEEHHCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCC ADLAAAFHTYGLEWTPSALRFYFDGRLIRTVTRDQVPVWLWDREHYVILNVAVNLEGASA CHHHHHHHHCCCEECHHHEEEEECCEEEEEECCCCCEEEEECCCCEEEEEEEEEECCCCC TAADYPQRMAVDYLRVYVAKP CHHCCHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]