Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158319000

Identifier: 158319000

GI number: 158319000

Start: 8895656

End: 8896789

Strand: Direct

Name: 158319000

Synonym: Franean1_7283

Alternate gene names: NA

Gene position: 8895656-8896789 (Clockwise)

Preceding gene: 158318999

Following gene: 158319004

Centisome position: 99.04

GC content: 70.9

Gene sequence:

>1134_bases
GTGAGGACCATCTCGCCGGGACGATCCCGGCGACGAGCCGCGGTGCTGCTGACGGCAGGCACGCTCGCGGCGGCGTCGGT
CGCCCTGACCGCCTGCGGCTCCGGCGGCGGGGCAGGCCCGCAGCCCAGCGCCACGCCGTCCACCGGCACCGGGACGGCCG
CCCCGTCCAGCGCCCCGGCGACCGCGGCCACCGACCCGTTCGCGACGGCGGCGCCCGTCGCCGCGGAGCGGCCGGTGGAG
TGCCCCGCCGGCGGGACCACCGTCAACAACGGCGGTGACCTGCGCAGCGCCCTGTCCGCGGCGAAGCCGGGCGCGATCAT
CCGGATGACCGACGGCGTCTACACCGGGGGCTACAAGCTGGCCGCCTCGGGCACCGAGGCCGCACCGATCTGGCTGTGCG
GCTCACCCAAGGCCGTCCTCGACGGCGAGGACGACACGGACTACGTGCTGCACCTGGACGGCGCGTCCTGGGTACGGGTG
GTCGGCTTCACCGTGCGCAACGGTCAGAAGGGCGTGATGGCGGACCGCGTCCAGCACTCGATCATCGCCCAGCTGCAGGT
GAACACGATCGGCGACGAGGCGATCCACCTGCGCACGGCGAGCTCGGACAACCTGGTCGTCGGCAACGTCATCCGCGACA
CCGGAAACCGGCGGGAGAAGTTCGGCGAGGGCGTCTACGTCGGGAGCGCGCACAGCAACTGGTGCAAGTACACCGACTGC
GGGCCCGACCGCAGCGACCGCAACTCGGTCATCGGCAACGACATCGCCGGCACGACCTCGGAGAACATCGACATCAAGGA
GGGCACGAGCGGCGGGGTGATCCGCGGGAACACCCTGTCGTCGGACTCCCTCGCCGAGGCCGACTCGTGGATTGACATCA
AGGGCAACGGCTGGCTGATCGAGGACAACACCGGCATCGGCGGCGGCACTCTGGAGGACGGTTTCCAGACCCACGTCGAG
CAGGAGAACTGGGGCCGGCAGAACACCTTCCGCCGCAACCGGCTCCCGGTGAACGCCAAGGGCTACGGCATCTACATCCA
CGAGGGTGCCGACACCCAGAACATCGTCAGCTGCGACAACCAGGTCAGCGGGGCGTCGTCGGGGCCGTCCAACATCGACT
GCTCGTCCGCCTGA

Upstream 100 bases:

>100_bases
CCAAGCCCGGTCCGGACGGCGACGAGAACCTCGAGATCATCGATCCGGTGGGCACGGCGCCAGGTCGCCGCCGCCGCCGT
CCCAAAGGGGGAAACAGCAG

Downstream 100 bases:

>100_bases
CGCGGGGCGCGCGCCAGATCCAGCAGGTCCGGCTCAGGGCACCATTGCCCTGAGCCGGACCTGTTCCTGCAGCCAGTAGA
GCTCCTGCGCCCACAGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: Parallel Beta-Helix Repeat-Containing Protein; Lipoprotein; Coagulation Factor 5/8 Type Domain Protein

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRTISPGRSRRRAAVLLTAGTLAAASVALTACGSGGGAGPQPSATPSTGTGTAAPSSAPATAATDPFATAAPVAAERPVE
CPAGGTTVNNGGDLRSALSAAKPGAIIRMTDGVYTGGYKLAASGTEAAPIWLCGSPKAVLDGEDDTDYVLHLDGASWVRV
VGFTVRNGQKGVMADRVQHSIIAQLQVNTIGDEAIHLRTASSDNLVVGNVIRDTGNRREKFGEGVYVGSAHSNWCKYTDC
GPDRSDRNSVIGNDIAGTTSENIDIKEGTSGGVIRGNTLSSDSLAEADSWIDIKGNGWLIEDNTGIGGGTLEDGFQTHVE
QENWGRQNTFRRNRLPVNAKGYGIYIHEGADTQNIVSCDNQVSGASSGPSNIDCSSA

Sequences:

>Translated_377_residues
MRTISPGRSRRRAAVLLTAGTLAAASVALTACGSGGGAGPQPSATPSTGTGTAAPSSAPATAATDPFATAAPVAAERPVE
CPAGGTTVNNGGDLRSALSAAKPGAIIRMTDGVYTGGYKLAASGTEAAPIWLCGSPKAVLDGEDDTDYVLHLDGASWVRV
VGFTVRNGQKGVMADRVQHSIIAQLQVNTIGDEAIHLRTASSDNLVVGNVIRDTGNRREKFGEGVYVGSAHSNWCKYTDC
GPDRSDRNSVIGNDIAGTTSENIDIKEGTSGGVIRGNTLSSDSLAEADSWIDIKGNGWLIEDNTGIGGGTLEDGFQTHVE
QENWGRQNTFRRNRLPVNAKGYGIYIHEGADTQNIVSCDNQVSGASSGPSNIDCSSA
>Mature_377_residues
MRTISPGRSRRRAAVLLTAGTLAAASVALTACGSGGGAGPQPSATPSTGTGTAAPSSAPATAATDPFATAAPVAAERPVE
CPAGGTTVNNGGDLRSALSAAKPGAIIRMTDGVYTGGYKLAASGTEAAPIWLCGSPKAVLDGEDDTDYVLHLDGASWVRV
VGFTVRNGQKGVMADRVQHSIIAQLQVNTIGDEAIHLRTASSDNLVVGNVIRDTGNRREKFGEGVYVGSAHSNWCKYTDC
GPDRSDRNSVIGNDIAGTTSENIDIKEGTSGGVIRGNTLSSDSLAEADSWIDIKGNGWLIEDNTGIGGGTLEDGFQTHVE
QENWGRQNTFRRNRLPVNAKGYGIYIHEGADTQNIVSCDNQVSGASSGPSNIDCSSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38792; Mature: 38792

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTISPGRSRRRAAVLLTAGTLAAASVALTACGSGGGAGPQPSATPSTGTGTAAPSSAPA
CCCCCCCCCCCEEEEEEEECHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAATDPFATAAPVAAERPVECPAGGTTVNNGGDLRSALSAAKPGAIIRMTDGVYTGGYKL
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCEEEEEECCEEECCEEE
AASGTEAAPIWLCGSPKAVLDGEDDTDYVLHLDGASWVRVVGFTVRNGQKGVMADRVQHS
EECCCCCCEEEEECCCCEEECCCCCCCEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHH
IIAQLQVNTIGDEAIHLRTASSDNLVVGNVIRDTGNRREKFGEGVYVGSAHSNWCKYTDC
EEEEEEEEECCCCEEEEEECCCCCEEEEHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCC
GPDRSDRNSVIGNDIAGTTSENIDIKEGTSGGVIRGNTLSSDSLAEADSWIDIKGNGWLI
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCHHCCCCEEEECCCCEEE
EDNTGIGGGTLEDGFQTHVEQENWGRQNTFRRNRLPVNAKGYGIYIHEGADTQNIVSCDN
ECCCCCCCCCCCCHHHHHCCHHCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCCEEECCC
QVSGASSGPSNIDCSSA
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTISPGRSRRRAAVLLTAGTLAAASVALTACGSGGGAGPQPSATPSTGTGTAAPSSAPA
CCCCCCCCCCCEEEEEEEECHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAATDPFATAAPVAAERPVECPAGGTTVNNGGDLRSALSAAKPGAIIRMTDGVYTGGYKL
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCEEEEEECCEEECCEEE
AASGTEAAPIWLCGSPKAVLDGEDDTDYVLHLDGASWVRVVGFTVRNGQKGVMADRVQHS
EECCCCCCEEEEECCCCEEECCCCCCCEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHH
IIAQLQVNTIGDEAIHLRTASSDNLVVGNVIRDTGNRREKFGEGVYVGSAHSNWCKYTDC
EEEEEEEEECCCCEEEEEECCCCCEEEEHHHHCCCCHHHHHCCCEEEECCCCCCCCCCCC
GPDRSDRNSVIGNDIAGTTSENIDIKEGTSGGVIRGNTLSSDSLAEADSWIDIKGNGWLI
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCHHCCCCEEEECCCCEEE
EDNTGIGGGTLEDGFQTHVEQENWGRQNTFRRNRLPVNAKGYGIYIHEGADTQNIVSCDN
ECCCCCCCCCCCCHHHHHCCHHCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCCEEECCC
QVSGASSGPSNIDCSSA
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA