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The map label for this gene is nodC [H]

Identifier: 158318998

GI number: 158318998

Start: 8891779

End: 8893059

Strand: Direct

Name: nodC [H]

Synonym: Franean1_7281

Alternate gene names: 158318998

Gene position: 8891779-8893059 (Clockwise)

Preceding gene: 158318995

Following gene: 158318999

Centisome position: 99.0

GC content: 68.15

Gene sequence:

>1281_bases
ATGGAGTGGTTCGGCGTCGCGTTCGATTTCGTTCGCGATCATCGTTCTCTGGTCCCGCTCGGGATCGCGGGCGTTGTCTC
CTGGGTGGTGTGGCTCACTCGCCGCCTGCTCTCCACCCGGTACCGCCCCGTCCGGAACAACTTCCGAGCCAGTACCTCGG
TGATCGTTCCATCGTTCCGGGAAGACCCCGACGTCCTCATCCGGTGCCTGGAGACCTGGCTCTCCCAGCAGCCGGACGAG
ATCATCATCATCCCGGATGTGGAGGACACCGAGCTCATAGCGAGGCTCGCCCAGCGCGCCGACCCGACGGTCCGCGTGAT
CCCGTTCGTCCACGAGGGCAAGCGTTCGGCGCTGGGGGTCGGCCTGTCCGCGGCGACCAGGGACATCGTCGTGCTCTGCG
ACTCCGACACCGCTTGGGAGCCGGGGCTGCTCGCCGCGGTGCAGATGCCGTTCGTCGACCCGCAGGTCGGCGGGGTGGGA
ACCCGGCAGAACGTCTACGAGCCGCGCAGCAGCGTGTGGCGGCGGGTCGCGAACTGGCTCGTCGACATCCGCTACCTCGA
CTACGTGCCGGCGCAGGGCCGGGTCGGCGCCGTCGCCTGCCTGTCCGGGCGCACGGCGGCCTACCGGCGCTCGGCGATCC
TGCCCGTGCTGCACAACCTGGAGCACGAGTTCTTCCTCGGCCGGCGGTGCATCGCCGGTGACGACGGCCGGCTGACCTGG
CTGGTGCTCGCGTCCGGCTACAAGACCATGCACCAGCACACGGCGCACGCGATGTCGATGTTCCCCGACAACCTGCGGGC
CTTCATCAAGCAGCGGGTGCGCTGGAGCCGGAACTCCTACCGGACCTACCTGACCGCCATCTACAAAGGCTGGCTGTGGC
GGCAGCCACTGATCACCCAGGTCAGCGTGCTGCAGATCGTGCTCACCCCGCTGACCATGGGTGTCGCGATGACCTACTTC
GTGCTGTGGATGTTCCGGCCGGAGGCGAACGCCCCGATCATCGCGATCGCCTGGCTGCTGCTCGGGCGGTTCATCCGCGG
GCTCTCCCACCTCAAGGAGCACCCGCGGGACATCTTCATCCTCCCGCTCACAGTGTTGATGATCATCGTCGTCGCGCTGC
CCATCAAGACCTGGGCGTTCGTGTCGATGAACAAGCAGGGCTGGCTGACCCGGCGCTCCGACCTCATCGGCGGGGAGGGC
CAGACCGACGCCTCTACGCGAACCAGCCCGGCCGCGAGCCCCCGCCCGGCGACAGCGACCGCGATGGGTGGTACCCGATG
A

Upstream 100 bases:

>100_bases
CCATCCGGCTGGCGCGCCGGATGGTTCGTACACGTCCCAACACGCTTCCCCATGACTCTGGCGTTCTCGGTGGCCTGCAG
CTGGGGGGGCAACACACAAG

Downstream 100 bases:

>100_bases
GGGCCCCGCACCTGGCCGGATCGCCGTTCCCGGCCGGCCGGCCGGTCACCGCGCGGGTCCCGTCCTGGATACGGCGGGCG
GCGCTGACCACCCTCGCGGC

Product: hyaluronan synthase

Products: NA

Alternate protein names: Nodulation protein C [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MEWFGVAFDFVRDHRSLVPLGIAGVVSWVVWLTRRLLSTRYRPVRNNFRASTSVIVPSFREDPDVLIRCLETWLSQQPDE
IIIIPDVEDTELIARLAQRADPTVRVIPFVHEGKRSALGVGLSAATRDIVVLCDSDTAWEPGLLAAVQMPFVDPQVGGVG
TRQNVYEPRSSVWRRVANWLVDIRYLDYVPAQGRVGAVACLSGRTAAYRRSAILPVLHNLEHEFFLGRRCIAGDDGRLTW
LVLASGYKTMHQHTAHAMSMFPDNLRAFIKQRVRWSRNSYRTYLTAIYKGWLWRQPLITQVSVLQIVLTPLTMGVAMTYF
VLWMFRPEANAPIIAIAWLLLGRFIRGLSHLKEHPRDIFILPLTVLMIIVVALPIKTWAFVSMNKQGWLTRRSDLIGGEG
QTDASTRTSPAASPRPATATAMGGTR

Sequences:

>Translated_426_residues
MEWFGVAFDFVRDHRSLVPLGIAGVVSWVVWLTRRLLSTRYRPVRNNFRASTSVIVPSFREDPDVLIRCLETWLSQQPDE
IIIIPDVEDTELIARLAQRADPTVRVIPFVHEGKRSALGVGLSAATRDIVVLCDSDTAWEPGLLAAVQMPFVDPQVGGVG
TRQNVYEPRSSVWRRVANWLVDIRYLDYVPAQGRVGAVACLSGRTAAYRRSAILPVLHNLEHEFFLGRRCIAGDDGRLTW
LVLASGYKTMHQHTAHAMSMFPDNLRAFIKQRVRWSRNSYRTYLTAIYKGWLWRQPLITQVSVLQIVLTPLTMGVAMTYF
VLWMFRPEANAPIIAIAWLLLGRFIRGLSHLKEHPRDIFILPLTVLMIIVVALPIKTWAFVSMNKQGWLTRRSDLIGGEG
QTDASTRTSPAASPRPATATAMGGTR
>Mature_426_residues
MEWFGVAFDFVRDHRSLVPLGIAGVVSWVVWLTRRLLSTRYRPVRNNFRASTSVIVPSFREDPDVLIRCLETWLSQQPDE
IIIIPDVEDTELIARLAQRADPTVRVIPFVHEGKRSALGVGLSAATRDIVVLCDSDTAWEPGLLAAVQMPFVDPQVGGVG
TRQNVYEPRSSVWRRVANWLVDIRYLDYVPAQGRVGAVACLSGRTAAYRRSAILPVLHNLEHEFFLGRRCIAGDDGRLTW
LVLASGYKTMHQHTAHAMSMFPDNLRAFIKQRVRWSRNSYRTYLTAIYKGWLWRQPLITQVSVLQIVLTPLTMGVAMTYF
VLWMFRPEANAPIIAIAWLLLGRFIRGLSHLKEHPRDIFILPLTVLMIIVVALPIKTWAFVSMNKQGWLTRRSDLIGGEG
QTDASTRTSPAASPRPATATAMGGTR

Specific function: Involved in the synthesis of Nod factor, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation [H]

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodC/HAS family [H]

Homologues:

Organism=Homo sapiens, GI20302153, Length=454, Percent_Identity=23.3480176211454, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4885391, Length=293, Percent_Identity=26.6211604095563, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI167466171, Length=292, Percent_Identity=29.1095890410959, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 48052; Mature: 48052

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWFGVAFDFVRDHRSLVPLGIAGVVSWVVWLTRRLLSTRYRPVRNNFRASTSVIVPSFR
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCC
EDPDVLIRCLETWLSQQPDEIIIIPDVEDTELIARLAQRADPTVRVIPFVHEGKRSALGV
CCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEHCCCCCHHHCC
GLSAATRDIVVLCDSDTAWEPGLLAAVQMPFVDPQVGGVGTRQNVYEPRSSVWRRVANWL
CHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VDIRYLDYVPAQGRVGAVACLSGRTAAYRRSAILPVLHNLEHEFFLGRRCIAGDDGRLTW
HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCEEE
LVLASGYKTMHQHTAHAMSMFPDNLRAFIKQRVRWSRNSYRTYLTAIYKGWLWRQPLITQ
EEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VSVLQIVLTPLTMGVAMTYFVLWMFRPEANAPIIAIAWLLLGRFIRGLSHLKEHPRDIFI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LPLTVLMIIVVALPIKTWAFVSMNKQGWLTRRSDLIGGEGQTDASTRTSPAASPRPATAT
HHHHHHHHHHHHHHHHHEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AMGGTR
CCCCCC
>Mature Secondary Structure
MEWFGVAFDFVRDHRSLVPLGIAGVVSWVVWLTRRLLSTRYRPVRNNFRASTSVIVPSFR
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCC
EDPDVLIRCLETWLSQQPDEIIIIPDVEDTELIARLAQRADPTVRVIPFVHEGKRSALGV
CCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEHCCCCCHHHCC
GLSAATRDIVVLCDSDTAWEPGLLAAVQMPFVDPQVGGVGTRQNVYEPRSSVWRRVANWL
CHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
VDIRYLDYVPAQGRVGAVACLSGRTAAYRRSAILPVLHNLEHEFFLGRRCIAGDDGRLTW
HHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCEEECCCCCCEEE
LVLASGYKTMHQHTAHAMSMFPDNLRAFIKQRVRWSRNSYRTYLTAIYKGWLWRQPLITQ
EEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VSVLQIVLTPLTMGVAMTYFVLWMFRPEANAPIIAIAWLLLGRFIRGLSHLKEHPRDIFI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LPLTVLMIIVVALPIKTWAFVSMNKQGWLTRRSDLIGGEGQTDASTRTSPAASPRPATAT
HHHHHHHHHHHHHHHHHEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AMGGTR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2615763; 8146173 [H]