| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318994
Identifier: 158318994
GI number: 158318994
Start: 8884924
End: 8885706
Strand: Direct
Name: 158318994
Synonym: Franean1_7277
Alternate gene names: NA
Gene position: 8884924-8885706 (Clockwise)
Preceding gene: 158318993
Following gene: 158318995
Centisome position: 98.92
GC content: 74.46
Gene sequence:
>783_bases GTGGCGGTGACCGAGGCCCGCCCGACCGTGGAGGTCGTCCGCCGTTCCGGCCGCTCCCGCGGGCGCCGGGGCACGGGGCC GGGCACGGGCCGGCTGGTCGCCACCGAGCTACTCAAGATCACAACGGGGCGGTGGCAGCTCGTCGGCCTCTGTGTCGCCC TGGCGGTCCACGTCCCGCTGCTGCTGATGTGGGGCGCCCAAGCCGATCCGTTCGCCGCGTGGAACGGCCTGCGCTCGCGC TCGGGGTTCCTGCTCGCCTACGCGATGATGTTCTTCGGGGTGATCCTGGTGACCGGTGAGTACCGGTACCGCACGGTCAC CCACGCCTGGCTGCTCACCCCGCGGCGGTCCCGGGTGCTGGGCGCCCAGGTGCTCACCGTGCTCGCCATCGGCGCGGCGA TGAGCACGGCGACGTTCGCCGCCTGGTGGGCGCGCGGGGCCGCCCGGCATGGCGCGCCGGCGATGCGCTCGGACCGGCCG GCGGAGTTGCTGTCGGCCTATGTGATCGTGGTCGTCATGGTGTGCGCGGCCGGGGTGGCGGGAGTGGCGGTGGGGACGCT GACCCGTGGCTCGTCCGCGGCCGCCGGCGCCATCGCACTCTCCGGGCTGGCCGAGGCCGTGCTCGACGGGGCCCGCTTCC ACGGCCCGGCGACCGCACCGTTGGGCGTCCTGCTCTGGCCCACCAGCGAGACACATGTCTCGTCCCTGCTCGCCGCGATC TCGTGGGCGGTGGTTCTCACCGCTGCCGCGAGCGCCTCACTGCACCGGGACCTGCCATCCTGA
Upstream 100 bases:
>100_bases CGCTCGTCGAGCTGCACACGACCGGCCCCGACCTGGAGCGGACGTTCTTCGACCTGACCAGCCGGGCCGACGGCGGGGCG CAAGAGCGGGCCGGAAGCGG
Downstream 100 bases:
>100_bases ACAAGGGACCAACCGAATCCGTGATGTGGCATAGGTCACTGCCGGCGCGGCGCGTGTCCCCATCCCCTGCCGCGCCGCAC CGCGATCGGCCTACGATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAVTEARPTVEVVRRSGRSRGRRGTGPGTGRLVATELLKITTGRWQLVGLCVALAVHVPLLLMWGAQADPFAAWNGLRSR SGFLLAYAMMFFGVILVTGEYRYRTVTHAWLLTPRRSRVLGAQVLTVLAIGAAMSTATFAAWWARGAARHGAPAMRSDRP AELLSAYVIVVVMVCAAGVAGVAVGTLTRGSSAAAGAIALSGLAEAVLDGARFHGPATAPLGVLLWPTSETHVSSLLAAI SWAVVLTAAASASLHRDLPS
Sequences:
>Translated_260_residues MAVTEARPTVEVVRRSGRSRGRRGTGPGTGRLVATELLKITTGRWQLVGLCVALAVHVPLLLMWGAQADPFAAWNGLRSR SGFLLAYAMMFFGVILVTGEYRYRTVTHAWLLTPRRSRVLGAQVLTVLAIGAAMSTATFAAWWARGAARHGAPAMRSDRP AELLSAYVIVVVMVCAAGVAGVAVGTLTRGSSAAAGAIALSGLAEAVLDGARFHGPATAPLGVLLWPTSETHVSSLLAAI SWAVVLTAAASASLHRDLPS >Mature_259_residues AVTEARPTVEVVRRSGRSRGRRGTGPGTGRLVATELLKITTGRWQLVGLCVALAVHVPLLLMWGAQADPFAAWNGLRSRS GFLLAYAMMFFGVILVTGEYRYRTVTHAWLLTPRRSRVLGAQVLTVLAIGAAMSTATFAAWWARGAARHGAPAMRSDRPA ELLSAYVIVVVMVCAAGVAGVAVGTLTRGSSAAAGAIALSGLAEAVLDGARFHGPATAPLGVLLWPTSETHVSSLLAAIS WAVVLTAAASASLHRDLPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27132; Mature: 27001
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTEARPTVEVVRRSGRSRGRRGTGPGTGRLVATELLKITTGRWQLVGLCVALAVHVPL CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLMWGAQADPFAAWNGLRSRSGFLLAYAMMFFGVILVTGEYRYRTVTHAWLLTPRRSRVL HHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEHHHHEECCCHHHHH GAQVLTVLAIGAAMSTATFAAWWARGAARHGAPAMRSDRPAELLSAYVIVVVMVCAAGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH GVAVGTLTRGSSAAAGAIALSGLAEAVLDGARFHGPATAPLGVLLWPTSETHVSSLLAAI HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCHHHHHHHHHHH SWAVVLTAAASASLHRDLPS HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVTEARPTVEVVRRSGRSRGRRGTGPGTGRLVATELLKITTGRWQLVGLCVALAVHVPL CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLMWGAQADPFAAWNGLRSRSGFLLAYAMMFFGVILVTGEYRYRTVTHAWLLTPRRSRVL HHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEHHHHEECCCHHHHH GAQVLTVLAIGAAMSTATFAAWWARGAARHGAPAMRSDRPAELLSAYVIVVVMVCAAGVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHH GVAVGTLTRGSSAAAGAIALSGLAEAVLDGARFHGPATAPLGVLLWPTSETHVSSLLAAI HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEECCCHHHHHHHHHHH SWAVVLTAAASASLHRDLPS HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA