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The map label for this gene is ydjA [H]

Identifier: 158318991

GI number: 158318991

Start: 8882494

End: 8883114

Strand: Reverse

Name: ydjA [H]

Synonym: Franean1_7274

Alternate gene names: 158318991

Gene position: 8883114-8882494 (Counterclockwise)

Preceding gene: 158318996

Following gene: 158318990

Centisome position: 98.9

GC content: 76.17

Gene sequence:

>621_bases
GTGGACGCCCTCGACTGCCTGATGACCCGACGTACCGCGACCCGGCTCGTGGAGCCCGGCCCCACCGACGAACAGCTCGC
CGTCATGCTCGCCGCCGCGACCACCGCGCCGGACCACAAGATGCTGCGCCCGTGGCGGTTCGTGGTGGTGCGCGGCGAAG
CCCGCGAGGTGCTGGCGAACGCCATCACCGCGGCGGCCGAGGCGGTCGGCGGCCTGGCCGAACCGGTCATCCGTAAGGCC
GCGGGCAAGGCGACCCGCTCGCCGGTCCTCATCGCCGTGATCGCCTCCCGGGTGCCCGGCGCGCGCGTCCCCCGCGCCGA
GCAGGACGCGTCCGCCGCTGCCGCGGCGCAGAACCTCTGCCTCGCCGCGCACGCCCAGGGAGTCGCCTCGGCGTGGAAGT
CGACGCCGCTGCCCGACAGTGACCAGGTCCGCGCGGTGTTCGGCCTGACGGGCGGCGAGGAGCTGCTCGGCTGGGTGGAG
CTGGGGACGCTCTCGGACGCCATCCCGCTGCCGCCGCGTGAGCCGGTCGCCCTGTCCGCGGTGGCCTCCGAGCTGACCAC
GGGCGGCCAGCTCGCCCCGGTCGAGTGGGCGGCCCAGCCCGTCCCCGTCGACGCCTACTGA

Upstream 100 bases:

>100_bases
CGGGAACCTGGCGTGCGCGGCGCCGATCCGGATCGATCAGGGCCAAATTAGGTCAAATTGCAAAACGCGCGGACGCGAAC
CCGAACCGAATGGAGCTGCT

Downstream 100 bases:

>100_bases
CCGGCCCGCCGGCTGGTACGCGGGCGATCGCCCGGGCTCTCCCGCCCGGGCCGCCCGGCCCCGGCGGCACCAGAAGACAT
GGCACCAGGAGATACGGCAC

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDALDCLMTRRTATRLVEPGPTDEQLAVMLAAATTAPDHKMLRPWRFVVVRGEAREVLANAITAAAEAVGGLAEPVIRKA
AGKATRSPVLIAVIASRVPGARVPRAEQDASAAAAAQNLCLAAHAQGVASAWKSTPLPDSDQVRAVFGLTGGEELLGWVE
LGTLSDAIPLPPREPVALSAVASELTTGGQLAPVEWAAQPVPVDAY

Sequences:

>Translated_206_residues
MDALDCLMTRRTATRLVEPGPTDEQLAVMLAAATTAPDHKMLRPWRFVVVRGEAREVLANAITAAAEAVGGLAEPVIRKA
AGKATRSPVLIAVIASRVPGARVPRAEQDASAAAAAQNLCLAAHAQGVASAWKSTPLPDSDQVRAVFGLTGGEELLGWVE
LGTLSDAIPLPPREPVALSAVASELTTGGQLAPVEWAAQPVPVDAY
>Mature_206_residues
MDALDCLMTRRTATRLVEPGPTDEQLAVMLAAATTAPDHKMLRPWRFVVVRGEAREVLANAITAAAEAVGGLAEPVIRKA
AGKATRSPVLIAVIASRVPGARVPRAEQDASAAAAAQNLCLAAHAQGVASAWKSTPLPDSDQVRAVFGLTGGEELLGWVE
LGTLSDAIPLPPREPVALSAVASELTTGGQLAPVEWAAQPVPVDAY

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=163, Percent_Identity=41.7177914110429, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21322; Mature: 21322

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALDCLMTRRTATRLVEPGPTDEQLAVMLAAATTAPDHKMLRPWRFVVVRGEAREVLAN
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHCCCEEEEEEECHHHHHHHH
AITAAAEAVGGLAEPVIRKAAGKATRSPVLIAVIASRVPGARVPRAEQDASAAAAAQNLC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHH
LAAHAQGVASAWKSTPLPDSDQVRAVFGLTGGEELLGWVELGTLSDAIPLPPREPVALSA
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VASELTTGGQLAPVEWAAQPVPVDAY
HHHHHCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MDALDCLMTRRTATRLVEPGPTDEQLAVMLAAATTAPDHKMLRPWRFVVVRGEAREVLAN
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHCCCEEEEEEECHHHHHHHH
AITAAAEAVGGLAEPVIRKAAGKATRSPVLIAVIASRVPGARVPRAEQDASAAAAAQNLC
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHH
LAAHAQGVASAWKSTPLPDSDQVRAVFGLTGGEELLGWVELGTLSDAIPLPPREPVALSA
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
VASELTTGGQLAPVEWAAQPVPVDAY
HHHHHCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]