Click here to switch to the map view.

The map label for this gene is aidB [H]

Identifier: 158318988

GI number: 158318988

Start: 8875864

End: 8877693

Strand: Reverse

Name: aidB [H]

Synonym: Franean1_7271

Alternate gene names: 158318988

Gene position: 8877693-8875864 (Counterclockwise)

Preceding gene: 158318990

Following gene: 158318983

Centisome position: 98.84

GC content: 69.73

Gene sequence:

>1830_bases
ATGGGGCACTACCGGAGCAATCTCCGCGACATCGAGTTCAACCTGTTCGAGGTGTTCGGCGTGGACCGGACGCTCGGGAC
CGGGCCCTTCGCGGAGATGGACCGCGACACAGCGCATGAGGTGCTCGCCGAGCTGGAGCGGGTCGCCGTCGGGCCGATCG
CCGAGTCCTTCGAGGACGCCGACCGGCACCCGCCGACACTCGACCCCGCCACCGGCACCGTCACACTGCCCGAGTCGTTC
CGCAAGTCCTTCGCGGCGGCGCAGGAGGGCGAGTGGTGGCGGCTCTACCTCCCGCCGCACCTGGGCGGCATGGGTGCCCC
GCCGACCATCGCCTGGGCGGCGTCCGAGCTGCTCCTCGGGGCGAACCCGGCGGTGTTCATGTACATGGCCGGGCCGACGT
TCGCCGCGATCCTCGAGGGCATCGGCACGCCATGGCAGAAGAAGATCGCGAACTGGGCCATCGAGCGGCACTGGGGCGCG
ACCATGGTGCTGACCGAGCCGGACGCCGGCTCCGACGTCGGCGCAGGCCGGGCGCGGGCCGTCGAGCAGCCGGACGGCAC
CTGGCACATCGAAGGTGTGAAGCGCTTCATCACCAGCGGTGACTGGGACATCCCGGAGAACATCTTCCACCTGGTGCTCG
CCCGCCCCGAGGGGCACGGCCCCGGCACCAAGGGCCTGTCGATGTTCGTCGTGCCCAAGTACCTGCCCGACCCGGAGACC
GGCGCCCCGGGCGCCCGCAACGGTGCCTACGTCACGAACCTTGAGAAGAAAATGGGCCTGAAGGTCTCGACCACCTGCGA
GCTGCGCTTCGGCGAGCGTGAGCCGGCCGTCGGATGGCTCGTCGGCGACGTCCACGACGGCATCGCGCAGATGTTCCGGG
TCATCGAGTACGCCCGGATGATGGTCGGCACGAAGGCGATCGCCACGTTGTCCACCGGGTACCTCAACGCGCTGGCCTTC
GCCCGCGAGCGGATCCAGGGCGCCGACCTGACCCGGGCGTCGGACAAGACCGCGCCGCGGGTGGCCATCATCAACCATCC
CGACGTGCGCCGGATGCTCATGCAGCAGAAGGCCTACGCGGAGGGGATGCGTGCCCTCGTGCTGTACACCGCTACCTTCC
AGGACGCCGTCACGCTGGCGGCGGCCCGCGGCGAGGTGGACGACAACGCGGTGCGGATGAACGACCTGCTGCTCCCGATC
GTGAAGGGAGTCGGCTCGGAGCGCTCCTACGAACTGCTGGCGAGCTCGCTGCAGGTCCTCGGCGGCTCCGGATACCTGCA
GGACTACCCGATCGAGCAGTACATCCGCGACGCGAAGATCGACACCCTGTACGAGGGCACGACGTCCATCCAGGGCCAGG
ACCTCTTCTTCCGGAAGATCGTCCGGGACAAGGGTCGGGCGCTGACCACTCTGTTCACGCAGGTCCAGGAGTTTGTGAAG
GGCGAGGCGGGCAACGGCGCGCTCCGCGCGGAGCGGGAGTCGCTGGGCGCGGCGCTCGACGAGTGCCAGGCCATGGTCGG
TTCGATGGTCGGGTTCCTCACCGCCACCGCCCAGGACAAGTCCCAGGTCTACCGGGTCGGGCTGAACACCACGCGGCTGC
TGATGAGCATCGGCGACCTCGTCGTCGGCTGGCTGCTGCTGCGCGGTGCCGACGCGGCGCTACGCGGGCTGGACGGCTCC
CCGTCCGAGCGCGACCGGGCGTTCTACGAGGGCAAGATCGCGGCCGCGCGCTGGTTCGCGGCCAACATCCTGCCGGAGCT
GCGCACACGCCGGACGGTGCTGGAGGGCACCGGTCTCGGGCTGATGGAGATGTCCGAAGCGGCGTTCTGA

Upstream 100 bases:

>100_bases
CCTTGGTTACTCGCGGGTAGCATGGGGCATGACCTACCAGCGAGTAACTACGCCCGCGCCGCCGATGATCATGCGGTGAG
CCGGAGGGGAGGAGCCGTCC

Downstream 100 bases:

>100_bases
CCGTTCGTCCCAGCTCGTTTCAGCCTGGTCGGATCGGTCCAGCCAGTGTGATCCTCCCGGGGCCGCGGTCGTGTCGGCGC
GGCCCCGGGAGGATCTTTGT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDADRHPPTLDPATGTVTLPESF
RKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGA
TMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPET
GAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAF
ARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPI
VKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVK
GEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDLVVGWLLLRGADAALRGLDGS
PSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLGLMEMSEAAF

Sequences:

>Translated_609_residues
MGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDADRHPPTLDPATGTVTLPESF
RKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGA
TMVLTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPET
GAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAF
ARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPI
VKGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVK
GEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDLVVGWLLLRGADAALRGLDGS
PSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLGLMEMSEAAF
>Mature_608_residues
GHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDADRHPPTLDPATGTVTLPESFR
KSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLGANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGAT
MVLTEPDAGSDVGAGRARAVEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPETG
APGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARMMVGTKAIATLSTGYLNALAFA
RERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYAEGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPIV
KGVGSERSYELLASSLQVLGGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVKG
EAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDLVVGWLLLRGADAALRGLDGSP
SERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLGLMEMSEAAF

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=482, Percent_Identity=26.3485477178423, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI4501859, Length=361, Percent_Identity=24.9307479224377, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4557231, Length=362, Percent_Identity=26.7955801104972, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI187960098, Length=362, Percent_Identity=26.7955801104972, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI4557233, Length=361, Percent_Identity=25.4847645429363, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082384, Length=380, Percent_Identity=26.3157894736842, Blast_Score=108, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=23.4159779614325, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=379, Percent_Identity=23.7467018469657, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI86563381, Length=379, Percent_Identity=23.7467018469657, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=297, Percent_Identity=29.2929292929293, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=303, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17570075, Length=310, Percent_Identity=26.7741935483871, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17506239, Length=367, Percent_Identity=22.3433242506812, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363737, Length=367, Percent_Identity=26.7029972752044, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24646207, Length=309, Percent_Identity=27.1844660194175, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24660351, Length=312, Percent_Identity=29.1666666666667, Blast_Score=80, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 66460; Mature: 66328

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDA
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH
DRHPPTLDPATGTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLG
CCCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
ANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGATMVLTEPDAGSDVGAGRARA
CCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
VEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPET
CCCCCCCEEHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCC
GAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARM
CCCCCCCCCEEEEHHHHHCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
MVGTKAIATLSTGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
EGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPIVKGVGSERSYELLASSLQVL
HCCEEEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVK
CCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC
GEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHH
VVGWLLLRGADAALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLG
HHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LMEMSEAAF
HHHHHHHCC
>Mature Secondary Structure 
GHYRSNLRDIEFNLFEVFGVDRTLGTGPFAEMDRDTAHEVLAELERVAVGPIAESFEDA
CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH
DRHPPTLDPATGTVTLPESFRKSFAAAQEGEWWRLYLPPHLGGMGAPPTIAWAASELLLG
CCCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
ANPAVFMYMAGPTFAAILEGIGTPWQKKIANWAIERHWGATMVLTEPDAGSDVGAGRARA
CCCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
VEQPDGTWHIEGVKRFITSGDWDIPENIFHLVLARPEGHGPGTKGLSMFVVPKYLPDPET
CCCCCCCEEHHHHHHHHCCCCCCCHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCC
GAPGARNGAYVTNLEKKMGLKVSTTCELRFGEREPAVGWLVGDVHDGIAQMFRVIEYARM
CCCCCCCCCEEEEHHHHHCCEEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
MVGTKAIATLSTGYLNALAFARERIQGADLTRASDKTAPRVAIINHPDVRRMLMQQKAYA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
EGMRALVLYTATFQDAVTLAAARGEVDDNAVRMNDLLLPIVKGVGSERSYELLASSLQVL
HCCEEEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
GGSGYLQDYPIEQYIRDAKIDTLYEGTTSIQGQDLFFRKIVRDKGRALTTLFTQVQEFVK
CCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHC
GEAGNGALRAERESLGAALDECQAMVGSMVGFLTATAQDKSQVYRVGLNTTRLLMSIGDL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHH
VVGWLLLRGADAALRGLDGSPSERDRAFYEGKIAAARWFAANILPELRTRRTVLEGTGLG
HHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LMEMSEAAF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]