Click here to switch to the map view.

The map label for this gene is cooC [H]

Identifier: 158318908

GI number: 158318908

Start: 8780867

End: 8781871

Strand: Direct

Name: cooC [H]

Synonym: Franean1_7191

Alternate gene names: 158318908

Gene position: 8780867-8781871 (Clockwise)

Preceding gene: 158318904

Following gene: 158318911

Centisome position: 97.76

GC content: 70.95

Gene sequence:

>1005_bases
ATGAAGATCGCCTTTGTCGGTAAGGGCGGGAGCGGAAAGACCACGCTCTCGGCCCTGCTGTGCCGCCACCTCGCCGCGCG
AGGTCATCCCGTCCTGGCCATCGACGCCGACATCAACCAGCACCTCGGTGCGGCGCTCGGCGGAGCGGGCGGCGAGGAGG
CCACGGCGCCGCCGATGGGTGAACACCTCGACGTGATCAAGGACTACCTGCGTGGCAGCAACCCGCGCATCCCGTCGGCC
GGGATGATGGTCAAGACGACACCGCCCGGTCCCGGGTCGCGGCTGCTGCGGACGGGTGACGACAACCCGCTGTGGGAGCG
TTTCGGCGTGGACGTCGACGGTGTCCGGCTACTCGCGACCGGCGCGTTCACCGAGGACGACCTCGGCGTCGCGTGCTTCC
ACTCGAAGCTCGGCGCGGTCGAGCTGCTGCTGAACCACCTGGTGGACGGCGCCGGCGAGTACGTCGTCGTCGACATGACG
GCGGGGGCCGACGCGTTCGCGTCCGGGCTGTTCACCCGCTTCGACCACACCTTCCTGGTCTGCGAGCCGACCCGGAAGGC
GGTCGCCGTCCACGACCAGTACCGGGAGTACGCGGCGGACTACGAGATCACCGTGTCGGCCGTGGGCAACAAGATCTCCG
ATGACTCGGATGTCGCGTTCCTGCGCGAGCACCTCGGCGCGGACCTGCGCGCCTGCTTCCGCCACTGCCCGCCCGTCCGC
GCCCTGGAGCAGGGCCGGCCGTTCCACCTCGACGACCTCGACCCGGAGACCAGGTCATCCCTGGCCACGCTGCAGGGCCT
GGTCGACCGGACCGTGCGCGACCCGGAACGGTTCGTGGTGCAGATGCACGAGATCCACCGCCGCAACGCCCGCGCCTGGG
CGAACAGGTCCGCCGGCACCGACCTCACCACGCAGATCGACCCCGCCTACCGCCCCCCGTACCCGCCGGTGCCCGAGCCG
CGCACGACCCCGACCCGAATCCCAGCCCGGTTCCCCACTCGCTAG

Upstream 100 bases:

>100_bases
TTGTCACCCGGCGGCCCGGCCTCCAGATTATCGAAAACGATAACGGTTATGATGCCGCTCTGATCGCGGCACCGCCGCCA
CGACCTCGGAGACAGCCACC

Downstream 100 bases:

>100_bases
CCCCACCCCACCCGGAGTTGCGTGGCGGGTTGGTGACTCCTTCCCGGGCCCCGCCCCCGGGGTGGCGGCTCCGGGTGGCG
GCTCCGGTCGCGGTGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKIAFVGKGGSGKTTLSALLCRHLAARGHPVLAIDADINQHLGAALGGAGGEEATAPPMGEHLDVIKDYLRGSNPRIPSA
GMMVKTTPPGPGSRLLRTGDDNPLWERFGVDVDGVRLLATGAFTEDDLGVACFHSKLGAVELLLNHLVDGAGEYVVVDMT
AGADAFASGLFTRFDHTFLVCEPTRKAVAVHDQYREYAADYEITVSAVGNKISDDSDVAFLREHLGADLRACFRHCPPVR
ALEQGRPFHLDDLDPETRSSLATLQGLVDRTVRDPERFVVQMHEIHRRNARAWANRSAGTDLTTQIDPAYRPPYPPVPEP
RTTPTRIPARFPTR

Sequences:

>Translated_334_residues
MKIAFVGKGGSGKTTLSALLCRHLAARGHPVLAIDADINQHLGAALGGAGGEEATAPPMGEHLDVIKDYLRGSNPRIPSA
GMMVKTTPPGPGSRLLRTGDDNPLWERFGVDVDGVRLLATGAFTEDDLGVACFHSKLGAVELLLNHLVDGAGEYVVVDMT
AGADAFASGLFTRFDHTFLVCEPTRKAVAVHDQYREYAADYEITVSAVGNKISDDSDVAFLREHLGADLRACFRHCPPVR
ALEQGRPFHLDDLDPETRSSLATLQGLVDRTVRDPERFVVQMHEIHRRNARAWANRSAGTDLTTQIDPAYRPPYPPVPEP
RTTPTRIPARFPTR
>Mature_334_residues
MKIAFVGKGGSGKTTLSALLCRHLAARGHPVLAIDADINQHLGAALGGAGGEEATAPPMGEHLDVIKDYLRGSNPRIPSA
GMMVKTTPPGPGSRLLRTGDDNPLWERFGVDVDGVRLLATGAFTEDDLGVACFHSKLGAVELLLNHLVDGAGEYVVVDMT
AGADAFASGLFTRFDHTFLVCEPTRKAVAVHDQYREYAADYEITVSAVGNKISDDSDVAFLREHLGADLRACFRHCPPVR
ALEQGRPFHLDDLDPETRSSLATLQGLVDRTVRDPERFVVQMHEIHRRNARAWANRSAGTDLTTQIDPAYRPPYPPVPEP
RTTPTRIPARFPTR

Specific function: Involved in the insertion of nickel into the carbon monoxide dehydrogenase (CODH) [H]

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 36285; Mature: 36285

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAFVGKGGSGKTTLSALLCRHLAARGHPVLAIDADINQHLGAALGGAGGEEATAPPMG
CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCH
EHLDVIKDYLRGSNPRIPSAGMMVKTTPPGPGSRLLRTGDDNPLWERFGVDVDGVRLLAT
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCHHHHHHCCCCCCEEEEEE
GAFTEDDLGVACFHSKLGAVELLLNHLVDGAGEYVVVDMTAGADAFASGLFTRFDHTFLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEE
CEPTRKAVAVHDQYREYAADYEITVSAVGNKISDDSDVAFLREHLGADLRACFRHCPPVR
ECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCHH
ALEQGRPFHLDDLDPETRSSLATLQGLVDRTVRDPERFVVQMHEIHRRNARAWANRSAGT
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DLTTQIDPAYRPPYPPVPEPRTTPTRIPARFPTR
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIAFVGKGGSGKTTLSALLCRHLAARGHPVLAIDADINQHLGAALGGAGGEEATAPPMG
CEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCH
EHLDVIKDYLRGSNPRIPSAGMMVKTTPPGPGSRLLRTGDDNPLWERFGVDVDGVRLLAT
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCHHHHHHCCCCCCEEEEEE
GAFTEDDLGVACFHSKLGAVELLLNHLVDGAGEYVVVDMTAGADAFASGLFTRFDHTFLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEE
CEPTRKAVAVHDQYREYAADYEITVSAVGNKISDDSDVAFLREHLGADLRACFRHCPPVR
ECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCHH
ALEQGRPFHLDDLDPETRSSLATLQGLVDRTVRDPERFVVQMHEIHRRNARAWANRSAGT
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
DLTTQIDPAYRPPYPPVPEPRTTPTRIPARFPTR
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9079911; 1644755 [H]