| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318847
Identifier: 158318847
GI number: 158318847
Start: 8706030
End: 8706887
Strand: Direct
Name: 158318847
Synonym: Franean1_7128
Alternate gene names: NA
Gene position: 8706030-8706887 (Clockwise)
Preceding gene: 158318846
Following gene: 158318849
Centisome position: 96.93
GC content: 72.61
Gene sequence:
>858_bases ATGCAGGACGGAACAGCACGGAAGCGGTCCGGCGGGCGGAGCGCAGCCGTGCCGGGCTTCCTCCCGAGCACCCACGCCTT CGGCTTCACCAACTCCTTCCCCCGCCAGCCCGTCCTGCGGATCCCGGTCGCGGGCCTCGGAGCGGTGCCGATCGGGGACG CCAGCCGTGGCCTGTGCGGCGGGATGATCTACGCCGTCCGCGACATGTTCGAGTTCGGCGTAGCGCCTCCGGAGATCACC AGCCCACCGGCCGCCGGGACGCCCCTCTACCGCTACATCGTGCGCCGGCTCTTCGACAGCTTCGACATCCCGCGCGGGGT CTACCGCTACTACCGCCTGACCAGCGCGGCCGACACCGACCTGACCCGCGGACCGCTGACCCGCCCCGGCGTCGGACGGA TCAGCGTCGACCGGGAATGGCCGCGGATCCGCCTCGACCTGGATCGCGGTCTGCTCTGCCCGCTCGGCGTCATCACCGTC CACTCGGCCGACCCGCTGCGCCTCGGCCTCAATCACCAGGTCCTCGCCTACGCGTACGAACAGCGCGGAAACCGGGTCAG GCTGCGGGTCTACGACCCGAACACATCCCGGGCGAGATCCGACGACGTCACCCTGTCATTCGACATCACGCCGCCGCTCG AAGTCCCGTTCCCCCGCCCGGCGGCACCGCCGCACGGGACCACTCCGGGCACTCCGGCCGCATCGGCCGCGCCGGTGACC ATCGAACACACGATCTCGATCGGCGGACGTCCGGTACGCGCGTTCTTCCGGTCGCGCTACCGCCGGGTCGACCCACGCCC CGCGCTCGGTCCGCCCCCGGGGCCCGCGGTCGCCGCGCCGGAGCCCCCGCCGACATGA
Upstream 100 bases:
>100_bases ATCCACCCCGGCAACCCCGCCGGGACGTGAAGATGGAGACGTGACCGACGAAGGGGCGGGCGACGGCACCACGCCGGGCG GCGCCGTGGGTGACGGCACC
Downstream 100 bases:
>100_bases TCGACTTTGCGTCCTCCGGCCAGCGGTCTACGGCACGCGTTTGTCGGCGGAGCGGACGATCCCCTATGCTTGCCCTGTTC TGAAGCCCGGCGCTGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MQDGTARKRSGGRSAAVPGFLPSTHAFGFTNSFPRQPVLRIPVAGLGAVPIGDASRGLCGGMIYAVRDMFEFGVAPPEIT SPPAAGTPLYRYIVRRLFDSFDIPRGVYRYYRLTSAADTDLTRGPLTRPGVGRISVDREWPRIRLDLDRGLLCPLGVITV HSADPLRLGLNHQVLAYAYEQRGNRVRLRVYDPNTSRARSDDVTLSFDITPPLEVPFPRPAAPPHGTTPGTPAASAAPVT IEHTISIGGRPVRAFFRSRYRRVDPRPALGPPPGPAVAAPEPPPT
Sequences:
>Translated_285_residues MQDGTARKRSGGRSAAVPGFLPSTHAFGFTNSFPRQPVLRIPVAGLGAVPIGDASRGLCGGMIYAVRDMFEFGVAPPEIT SPPAAGTPLYRYIVRRLFDSFDIPRGVYRYYRLTSAADTDLTRGPLTRPGVGRISVDREWPRIRLDLDRGLLCPLGVITV HSADPLRLGLNHQVLAYAYEQRGNRVRLRVYDPNTSRARSDDVTLSFDITPPLEVPFPRPAAPPHGTTPGTPAASAAPVT IEHTISIGGRPVRAFFRSRYRRVDPRPALGPPPGPAVAAPEPPPT >Mature_285_residues MQDGTARKRSGGRSAAVPGFLPSTHAFGFTNSFPRQPVLRIPVAGLGAVPIGDASRGLCGGMIYAVRDMFEFGVAPPEIT SPPAAGTPLYRYIVRRLFDSFDIPRGVYRYYRLTSAADTDLTRGPLTRPGVGRISVDREWPRIRLDLDRGLLCPLGVITV HSADPLRLGLNHQVLAYAYEQRGNRVRLRVYDPNTSRARSDDVTLSFDITPPLEVPFPRPAAPPHGTTPGTPAASAAPVT IEHTISIGGRPVRAFFRSRYRRVDPRPALGPPPGPAVAAPEPPPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30872; Mature: 30872
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDGTARKRSGGRSAAVPGFLPSTHAFGFTNSFPRQPVLRIPVAGLGAVPIGDASRGLCG CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHH GMIYAVRDMFEFGVAPPEITSPPAAGTPLYRYIVRRLFDSFDIPRGVYRYYRLTSAADTD HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC LTRGPLTRPGVGRISVDREWPRIRLDLDRGLLCPLGVITVHSADPLRLGLNHQVLAYAYE CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCEEEEEHH QRGNRVRLRVYDPNTSRARSDDVTLSFDITPPLEVPFPRPAAPPHGTTPGTPAASAAPVT HCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE IEHTISIGGRPVRAFFRSRYRRVDPRPALGPPPGPAVAAPEPPPT EEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQDGTARKRSGGRSAAVPGFLPSTHAFGFTNSFPRQPVLRIPVAGLGAVPIGDASRGLCG CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHH GMIYAVRDMFEFGVAPPEITSPPAAGTPLYRYIVRRLFDSFDIPRGVYRYYRLTSAADTD HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCC LTRGPLTRPGVGRISVDREWPRIRLDLDRGLLCPLGVITVHSADPLRLGLNHQVLAYAYE CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCEEECCCCCEEEEEHH QRGNRVRLRVYDPNTSRARSDDVTLSFDITPPLEVPFPRPAAPPHGTTPGTPAASAAPVT HCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE IEHTISIGGRPVRAFFRSRYRRVDPRPALGPPPGPAVAAPEPPPT EEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA