| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318830
Identifier: 158318830
GI number: 158318830
Start: 8676579
End: 8677937
Strand: Direct
Name: 158318830
Synonym: Franean1_7106
Alternate gene names: NA
Gene position: 8676579-8677937 (Clockwise)
Preceding gene: 158318829
Following gene: 158318831
Centisome position: 96.6
GC content: 64.83
Gene sequence:
>1359_bases ATGGCCTCCCTGCGCCACCGAACTTCATATCGACCGAAAGTCACGGCAACGCTGCTGACCGTTGTTGTCGTGGCCGTTGC GGTCTCGTGTTCATCTGATGAAAAGGCTGCAGCCGCCAAGTCACCACCCCCAACGAAAGCCGACGCAGGGCACTCGCTGA AGATCGACTCGAAACCACTCTCGGGACCAGTCTGCAAGACGGGCGAGGGTGGCACGCTTTTCGTCACCACGTCGTGCGGC GACCCGCTTCTCAACCGGCCGTACGTAGATAAGGACGAACGGCGAACTGTCACCGATAAAGACACGGGTGTCACGGTTGG CTACCGGTATGTTCACGGCGGATTCCGAGAGAGTAAGGGTAAGTTCTCTTTCTATTTCCCCAGCGAGTACCAGGGACGAT TCTTTCAGCCCACCTACCCGACCGTTTCTGTCGAGGATGCGGCGCCGCACGACATCGCGTTCGCCATCTCGAATAACGCC TACCTGGTGACGACCAACAACGGTGGGGGTCTCCCGCAGGCCGGCGAGATCGGGGGCGTCCGCGTCAATGCGGCGGCCGC GAAGTTCTCGCGCACCGTCGCGGCGCAGGTGTATGAGGACTCTGCCCGGCCACGGGGTTATATCTACGGCGCGAGTGGCG GTGCCTACCAGACTCTCGGCGCTCTGGAGAACTCCGAGGACGTTTGGGACGGTGGCGTGCCCATGGTCCCCGGTACTCCG AACGCCATCCCGAGCAGCCAGACGGTGCCGCTCCTCGGCCTGCGCGTGCTTCACGACAAGCTCCCCCAGATCGTCGATGC GATGGAGCCAGGTGGCAGCGGGAAGCCCTACGCCGGGCTCACCGACGAGCAGCAGGCGGTACTGCGGGAAGTGACCCGGA TGGGCTTCCCGCCGCGTGGCTGGTGGGACTACAAGAACATGAACACCGACACGTTCGAGGCGGTGGCCGGAGGCGTCCGC ATCCTCGATCCGACCTATGCCGACGATTTCTGGACCAAACCCGGTTACGCCGGCACGGATCCGGCCTCATCCGTCGGCGC CTCCCGAATTCAGGCTGAAGCCGACGTCAGTGACATCACTGGCAGCCCGGTCACTGGGCTGACCCTCTCCAGCGTGCCCC AGGGGGACCTGACGGGCGTCGACCTCGTCGTCCTCACCGGAGCGGCAGCCGGGAAGACCATCCCGTTCGTGAAGGTGAGC GGCACCGAGGCCACCTTCGGTAACGGCGCGGACACCGCTGTCACCGGTGCGCTCAAACCGGGCGACCGGGTCCGCCTAGT ACTACAGCCCCAGTGGTCGCCGTGTGGTCTCTCGTCGCGGATACGGCGTGGCGTGTGGCGTGGGGCGGCCACCGCGTGA
Upstream 100 bases:
>100_bases CCAGCTATCTTCGCGCCCCGTTCGACTCTCACCCGATAGATCGCGCTGCAGAGTCGGATAAGTACGGGGCGCACACTTGA GATCGAGGACGGTTAGATCT
Downstream 100 bases:
>100_bases TTCTCCGTAGTCTGTGAGAACAAAAGAAGAAGCCGCGGTGGCCGCGGCACGTAGCGTATCCGGGATGAACGTGGCGGTGT GGGAGGCGGGGCTGGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MASLRHRTSYRPKVTATLLTVVVVAVAVSCSSDEKAAAAKSPPPTKADAGHSLKIDSKPLSGPVCKTGEGGTLFVTTSCG DPLLNRPYVDKDERRTVTDKDTGVTVGYRYVHGGFRESKGKFSFYFPSEYQGRFFQPTYPTVSVEDAAPHDIAFAISNNA YLVTTNNGGGLPQAGEIGGVRVNAAAAKFSRTVAAQVYEDSARPRGYIYGASGGAYQTLGALENSEDVWDGGVPMVPGTP NAIPSSQTVPLLGLRVLHDKLPQIVDAMEPGGSGKPYAGLTDEQQAVLREVTRMGFPPRGWWDYKNMNTDTFEAVAGGVR ILDPTYADDFWTKPGYAGTDPASSVGASRIQAEADVSDITGSPVTGLTLSSVPQGDLTGVDLVVLTGAAAGKTIPFVKVS GTEATFGNGADTAVTGALKPGDRVRLVLQPQWSPCGLSSRIRRGVWRGAATA
Sequences:
>Translated_452_residues MASLRHRTSYRPKVTATLLTVVVVAVAVSCSSDEKAAAAKSPPPTKADAGHSLKIDSKPLSGPVCKTGEGGTLFVTTSCG DPLLNRPYVDKDERRTVTDKDTGVTVGYRYVHGGFRESKGKFSFYFPSEYQGRFFQPTYPTVSVEDAAPHDIAFAISNNA YLVTTNNGGGLPQAGEIGGVRVNAAAAKFSRTVAAQVYEDSARPRGYIYGASGGAYQTLGALENSEDVWDGGVPMVPGTP NAIPSSQTVPLLGLRVLHDKLPQIVDAMEPGGSGKPYAGLTDEQQAVLREVTRMGFPPRGWWDYKNMNTDTFEAVAGGVR ILDPTYADDFWTKPGYAGTDPASSVGASRIQAEADVSDITGSPVTGLTLSSVPQGDLTGVDLVVLTGAAAGKTIPFVKVS GTEATFGNGADTAVTGALKPGDRVRLVLQPQWSPCGLSSRIRRGVWRGAATA >Mature_451_residues ASLRHRTSYRPKVTATLLTVVVVAVAVSCSSDEKAAAAKSPPPTKADAGHSLKIDSKPLSGPVCKTGEGGTLFVTTSCGD PLLNRPYVDKDERRTVTDKDTGVTVGYRYVHGGFRESKGKFSFYFPSEYQGRFFQPTYPTVSVEDAAPHDIAFAISNNAY LVTTNNGGGLPQAGEIGGVRVNAAAAKFSRTVAAQVYEDSARPRGYIYGASGGAYQTLGALENSEDVWDGGVPMVPGTPN AIPSSQTVPLLGLRVLHDKLPQIVDAMEPGGSGKPYAGLTDEQQAVLREVTRMGFPPRGWWDYKNMNTDTFEAVAGGVRI LDPTYADDFWTKPGYAGTDPASSVGASRIQAEADVSDITGSPVTGLTLSSVPQGDLTGVDLVVLTGAAAGKTIPFVKVSG TEATFGNGADTAVTGALKPGDRVRLVLQPQWSPCGLSSRIRRGVWRGAATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47512; Mature: 47380
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLRHRTSYRPKVTATLLTVVVVAVAVSCSSDEKAAAAKSPPPTKADAGHSLKIDSKPL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCC SGPVCKTGEGGTLFVTTSCGDPLLNRPYVDKDERRTVTDKDTGVTVGYRYVHGGFRESKG CCCCEECCCCCEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCC KFSFYFPSEYQGRFFQPTYPTVSVEDAAPHDIAFAISNNAYLVTTNNGGGLPQAGEIGGV CEEEECCCCCCCCEECCCCCEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCE RVNAAAAKFSRTVAAQVYEDSARPRGYIYGASGGAYQTLGALENSEDVWDGGVPMVPGTP EEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCC NAIPSSQTVPLLGLRVLHDKLPQIVDAMEPGGSGKPYAGLTDEQQAVLREVTRMGFPPRG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC WWDYKNMNTDTFEAVAGGVRILDPTYADDFWTKPGYAGTDPASSVGASRIQAEADVSDIT CCCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCC GSPVTGLTLSSVPQGDLTGVDLVVLTGAAAGKTIPFVKVSGTEATFGNGADTAVTGALKP CCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC GDRVRLVLQPQWSPCGLSSRIRRGVWRGAATA CCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure ASLRHRTSYRPKVTATLLTVVVVAVAVSCSSDEKAAAAKSPPPTKADAGHSLKIDSKPL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCEEEECCCCC SGPVCKTGEGGTLFVTTSCGDPLLNRPYVDKDERRTVTDKDTGVTVGYRYVHGGFRESKG CCCCEECCCCCEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCEEEEEEEEECCCCCCCC KFSFYFPSEYQGRFFQPTYPTVSVEDAAPHDIAFAISNNAYLVTTNNGGGLPQAGEIGGV CEEEECCCCCCCCEECCCCCEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCE RVNAAAAKFSRTVAAQVYEDSARPRGYIYGASGGAYQTLGALENSEDVWDGGVPMVPGTP EEEHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCC NAIPSSQTVPLLGLRVLHDKLPQIVDAMEPGGSGKPYAGLTDEQQAVLREVTRMGFPPRG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC WWDYKNMNTDTFEAVAGGVRILDPTYADDFWTKPGYAGTDPASSVGASRIQAEADVSDIT CCCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCC GSPVTGLTLSSVPQGDLTGVDLVVLTGAAAGKTIPFVKVSGTEATFGNGADTAVTGALKP CCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC GDRVRLVLQPQWSPCGLSSRIRRGVWRGAATA CCEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA