| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318816
Identifier: 158318816
GI number: 158318816
Start: 8657126
End: 8657683
Strand: Direct
Name: 158318816
Synonym: Franean1_7088
Alternate gene names: NA
Gene position: 8657126-8657683 (Clockwise)
Preceding gene: 158318815
Following gene: 158318817
Centisome position: 96.38
GC content: 60.75
Gene sequence:
>558_bases ATGTCCGTCGAGGACGAGCTCAAGGAACTTCGCCGCGAGCTCCGGTACGTCACGGACCGTCTCGCGATTCTCGACTGCGT CATGAAGCAGTCACGCGGTCACGACCGCCATGACATCGAGCTTATGGCAAGCGTCTACCACAACGATGGAGTCGACGAGC ACGGACCCGTCGTGAAGCTCGGCCCCGACTACGGCGAGTACGCCAACCAGGCTCACTCGTCGGTTTTTGTCGATCACTTG CACAATATCACGACCCACACCTGCGAGATCGACGGCGACGAGGCTCACTGCGAAAGCTACGTCATCGGTGCTATGCGTTC CCGCGACGGCAAGACCGTGCACATCTTCGGAGGAAGATACCTCGATCGCGTCGAGCGGCGGGACGGCGTGTGGAGGATCG CGTTGCGGCGGTGCACCCTCGAGTGGACGATGAACGGCGACACGTCACTCCTTTCCTCCGGTTCGTTCACAGGCTTCATC AAGGGAACGTGGGACAAGAACGATCCGTCGTATGCGCGGCCCTTGGACCTGGAGAAGACCCCGGTCAAGAAGTGGTGA
Upstream 100 bases:
>100_bases AGCGCCAGCTATGGCCTCCTCTGACTCCGAGGTCGGGGCGTTGGGGTCCAAGGCTTCATTGGTCGATGGCAAGTGACTGC GACGATGAGGGAGAACCACC
Downstream 100 bases:
>100_bases GGATGACGGGCGCGGCACATCAACGATGGAAGGACCGATGAACATGGCCCGAATCGAACCGCTCCCAGCCAAGAAATGGC CCGCGGAGATGCGGGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSVEDELKELRRELRYVTDRLAILDCVMKQSRGHDRHDIELMASVYHNDGVDEHGPVVKLGPDYGEYANQAHSSVFVDHL HNITTHTCEIDGDEAHCESYVIGAMRSRDGKTVHIFGGRYLDRVERRDGVWRIALRRCTLEWTMNGDTSLLSSGSFTGFI KGTWDKNDPSYARPLDLEKTPVKKW
Sequences:
>Translated_185_residues MSVEDELKELRRELRYVTDRLAILDCVMKQSRGHDRHDIELMASVYHNDGVDEHGPVVKLGPDYGEYANQAHSSVFVDHL HNITTHTCEIDGDEAHCESYVIGAMRSRDGKTVHIFGGRYLDRVERRDGVWRIALRRCTLEWTMNGDTSLLSSGSFTGFI KGTWDKNDPSYARPLDLEKTPVKKW >Mature_184_residues SVEDELKELRRELRYVTDRLAILDCVMKQSRGHDRHDIELMASVYHNDGVDEHGPVVKLGPDYGEYANQAHSSVFVDHLH NITTHTCEIDGDEAHCESYVIGAMRSRDGKTVHIFGGRYLDRVERRDGVWRIALRRCTLEWTMNGDTSLLSSGSFTGFIK GTWDKNDPSYARPLDLEKTPVKKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21221; Mature: 21090
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEDELKELRRELRYVTDRLAILDCVMKQSRGHDRHDIELMASVYHNDGVDEHGPVVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEE GPDYGEYANQAHSSVFVDHLHNITTHTCEIDGDEAHCESYVIGAMRSRDGKTVHIFGGRY CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHH LDRVERRDGVWRIALRRCTLEWTMNGDTSLLSSGSFTGFIKGTWDKNDPSYARPLDLEKT HHHHHHCCCCEEEEEEHEEEEEEECCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC PVKKW CCCCC >Mature Secondary Structure SVEDELKELRRELRYVTDRLAILDCVMKQSRGHDRHDIELMASVYHNDGVDEHGPVVKL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEE GPDYGEYANQAHSSVFVDHLHNITTHTCEIDGDEAHCESYVIGAMRSRDGKTVHIFGGRY CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHH LDRVERRDGVWRIALRRCTLEWTMNGDTSLLSSGSFTGFIKGTWDKNDPSYARPLDLEKT HHHHHHCCCCEEEEEEHEEEEEEECCCCHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC PVKKW CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA