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The map label for this gene is ycjP [C]

Identifier: 158318780

GI number: 158318780

Start: 8605339

End: 8606178

Strand: Direct

Name: ycjP [C]

Synonym: Franean1_7051

Alternate gene names: 158318780

Gene position: 8605339-8606178 (Clockwise)

Preceding gene: 158318779

Following gene: 158318781

Centisome position: 95.81

GC content: 65.71

Gene sequence:

>840_bases
ATGATCAGCACACGCACCCGTCCAGGGAACACCCGAGCGCTGCTGTGGCTCCTGCTGATTCTTGTGGTCGTGCTCTACGG
ATTCCCGTTCGCCTACCTGGTGGGCACCTCGTTCAAGACACCGTCAGACGCGATCTCCGTGCCGCCGGCGATCCTGCCGC
GTGGCTGGAGCCTGGAGAACTACCGCAGCGCACTGACCACGGCGGGTGTGGTACCCGCCTTCGTCAACAGCTTCAGCACC
GCGGCCACCAGCACGGTCTTGTCGCTGGTGCTCGCGGTGCCCGCCGCCTACGGAATCACCCGTTACCGCACCGTGAGTGG
TCGGGTGTTCATCATGGTGGCCCTGGTCACCCGCATGGTCCCGCCGGTGGCAATCGGTGTCCCGCTGGTGGGCATGATGA
ATTTCCTGCACCTGCGGGACACGCCGGCCGGCCTCGCGCTGGCGCACACCACGATTTCCCTGCCCCTGTCCATCTGGCTC
CTGACGAGCTTCTTCGCGGCCGTTCCGGTAGAGCTGGAAGATGCGGCGAAGGTGGACGGATGCGGCCGCATGGGGGTGCT
GTGGCGGGTGGTCGTTCCCGTCATCTCCGGCGGACTCGCGGTCGTCGCGATCTTCGCTTTCCTCGCCTCGTGGAACGAGT
TCCTCTTCGCCCTCCTGCTGACCGCGGTGGAGGCGCAGACAACACCGATCGTCATCGCCAACTTCCAGACGCAGTTCGGC
CTACAGTGGGGGCCGATGACGGCGCTGGCAACCGTCTACTCCATTCCCGTCGTCCTGTTCACCCTTCTTCTCCAGCGGCG
CATCGTCGCCGGTCTCACACTGGGCGCGGTGAAGGGCTGA

Upstream 100 bases:

>100_bases
CCGGACTCGCCTCCGCCATGGGCACCCTCTACCTGCTGGCCATGTTCGTCCTCGCGGCGGTCGCGCTCGCCACGATCTGG
AACCCGGGGAAGGAGTCAGC

Downstream 100 bases:

>100_bases
CCGACCGCCCCGGCGCACAGCCAGAGCCGGCAGGAAAAAACCCGGAGAACAGGGAAGAACAGGCACGAATGTCCTTTCTC
GACTCACCGTCACGTCAACG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MISTRTRPGNTRALLWLLLILVVVLYGFPFAYLVGTSFKTPSDAISVPPAILPRGWSLENYRSALTTAGVVPAFVNSFST
AATSTVLSLVLAVPAAYGITRYRTVSGRVFIMVALVTRMVPPVAIGVPLVGMMNFLHLRDTPAGLALAHTTISLPLSIWL
LTSFFAAVPVELEDAAKVDGCGRMGVLWRVVVPVISGGLAVVAIFAFLASWNEFLFALLLTAVEAQTTPIVIANFQTQFG
LQWGPMTALATVYSIPVVLFTLLLQRRIVAGLTLGAVKG

Sequences:

>Translated_279_residues
MISTRTRPGNTRALLWLLLILVVVLYGFPFAYLVGTSFKTPSDAISVPPAILPRGWSLENYRSALTTAGVVPAFVNSFST
AATSTVLSLVLAVPAAYGITRYRTVSGRVFIMVALVTRMVPPVAIGVPLVGMMNFLHLRDTPAGLALAHTTISLPLSIWL
LTSFFAAVPVELEDAAKVDGCGRMGVLWRVVVPVISGGLAVVAIFAFLASWNEFLFALLLTAVEAQTTPIVIANFQTQFG
LQWGPMTALATVYSIPVVLFTLLLQRRIVAGLTLGAVKG
>Mature_279_residues
MISTRTRPGNTRALLWLLLILVVVLYGFPFAYLVGTSFKTPSDAISVPPAILPRGWSLENYRSALTTAGVVPAFVNSFST
AATSTVLSLVLAVPAAYGITRYRTVSGRVFIMVALVTRMVPPVAIGVPLVGMMNFLHLRDTPAGLALAHTTISLPLSIWL
LTSFFAAVPVELEDAAKVDGCGRMGVLWRVVVPVISGGLAVVAIFAFLASWNEFLFALLLTAVEAQTTPIVIANFQTQFG
LQWGPMTALATVYSIPVVLFTLLLQRRIVAGLTLGAVKG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=34.0823970037453, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=28.7735849056604, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789860, Length=265, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29803; Mature: 29803

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTRTRPGNTRALLWLLLILVVVLYGFPFAYLVGTSFKTPSDAISVPPAILPRGWSLEN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHH
YRSALTTAGVVPAFVNSFSTAATSTVLSLVLAVPAAYGITRYRTVSGRVFIMVALVTRMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCHHHHHHHHHHHHC
PPVAIGVPLVGMMNFLHLRDTPAGLALAHTTISLPLSIWLLTSFFAAVPVELEDAAKVDG
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
CGRMGVLWRVVVPVISGGLAVVAIFAFLASWNEFLFALLLTAVEAQTTPIVIANFQTQFG
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHC
LQWGPMTALATVYSIPVVLFTLLLQRRIVAGLTLGAVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISTRTRPGNTRALLWLLLILVVVLYGFPFAYLVGTSFKTPSDAISVPPAILPRGWSLEN
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHH
YRSALTTAGVVPAFVNSFSTAATSTVLSLVLAVPAAYGITRYRTVSGRVFIMVALVTRMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCHHHHHHHHHHHHC
PPVAIGVPLVGMMNFLHLRDTPAGLALAHTTISLPLSIWLLTSFFAAVPVELEDAAKVDG
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
CGRMGVLWRVVVPVISGGLAVVAIFAFLASWNEFLFALLLTAVEAQTTPIVIANFQTQFG
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHC
LQWGPMTALATVYSIPVVLFTLLLQRRIVAGLTLGAVKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]