| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is scrK [H]
Identifier: 158318765
GI number: 158318765
Start: 8586871
End: 8587626
Strand: Reverse
Name: scrK [H]
Synonym: Franean1_7036
Alternate gene names: 158318765
Gene position: 8587626-8586871 (Counterclockwise)
Preceding gene: 158318766
Following gene: 158318764
Centisome position: 95.61
GC content: 69.97
Gene sequence:
>756_bases ATGATCGATCAGAGGGACACCGCCCGCGTGATCGTCGTCGGCGAGGCCCTCATCGACATCGTGCACCGAGCGGACGGGAC CGTCACGGAGACACCGGGTGGCAGTCCCGCCAATGTCGCCCTCACACTCGGCCGACTCGGCGTGCCGGTGCGGCTGGTCA CCCAACTGGCCGACAACGCCGGCGGGCGGGCTGTGCGCGCCTGGCTCGTCGAGTCAGGCGCGCAGGTATCCGCACAGATC CCGGATGGAGGCCGCACATCGACCGCGATCGCGCGTCTCGATGCGACCGGCGCCGCGACCTACGAGTTTGACGTCACATG GTCCATCACGGTGCCCGAACTCGGAGCGGTCGGGGCTTTACAGGTCGGATCCCTGGGGGGTCTACTCGTGCCCGACGCGA ACGCCGTCGCCAGCCTCGTAGCCGCGGTCGGTGACGCCCTCGTCAGCAACGACCCCGGCATCCGTCCCTCACTCATCGGC GACCCTGTGGCGGCACGTTCGCGCGTCGAGCGCCTGGTGGCAGCCGCCGCCGTGGTGAAAGCGAGCGAAGGCGACCTGCG CTGGCTGTATCCGCTCGCCTCGCCCGTCCATGTGGCCCGTCGCTGGCGTGCAGCCGGACCCGCCCTCGCCCAGGTGCTGC GCCGCTGCGCCCACAACGCCGCAATCACAGTCTCACGCGCCGGCGCCGACCCACCCTGGGCCTCGGAGATCGAAACAACC TGTATCGATTCGCTCCCCGCGACGACGAATGGCTGA
Upstream 100 bases:
>100_bases TCATGGCCTACACCACGATGATTACCATCCCGATGATCATCGTGTTCCTCGCCTTCCAGCGTTCGTTTATCACCAGCATT GCCACCACCGGAGTGAAGGG
Downstream 100 bases:
>100_bases GATGTTCACGCTGCGCGACTCCTGGGTGTGGGACTTCTGGTTCGCCGATGACGGCGACGTGTACCACCTCTTCTTCCTGC ACGCGTCCCGGGCACTGCAC
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MIDQRDTARVIVVGEALIDIVHRADGTVTETPGGSPANVALTLGRLGVPVRLVTQLADNAGGRAVRAWLVESGAQVSAQI PDGGRTSTAIARLDATGAATYEFDVTWSITVPELGAVGALQVGSLGGLLVPDANAVASLVAAVGDALVSNDPGIRPSLIG DPVAARSRVERLVAAAAVVKASEGDLRWLYPLASPVHVARRWRAAGPALAQVLRRCAHNAAITVSRAGADPPWASEIETT CIDSLPATTNG
Sequences:
>Translated_251_residues MIDQRDTARVIVVGEALIDIVHRADGTVTETPGGSPANVALTLGRLGVPVRLVTQLADNAGGRAVRAWLVESGAQVSAQI PDGGRTSTAIARLDATGAATYEFDVTWSITVPELGAVGALQVGSLGGLLVPDANAVASLVAAVGDALVSNDPGIRPSLIG DPVAARSRVERLVAAAAVVKASEGDLRWLYPLASPVHVARRWRAAGPALAQVLRRCAHNAAITVSRAGADPPWASEIETT CIDSLPATTNG >Mature_251_residues MIDQRDTARVIVVGEALIDIVHRADGTVTETPGGSPANVALTLGRLGVPVRLVTQLADNAGGRAVRAWLVESGAQVSAQI PDGGRTSTAIARLDATGAATYEFDVTWSITVPELGAVGALQVGSLGGLLVPDANAVASLVAAVGDALVSNDPGIRPSLIG DPVAARSRVERLVAAAAVVKASEGDLRWLYPLASPVHVARRWRAAGPALAQVLRRCAHNAAITVSRAGADPPWASEIETT CIDSLPATTNG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 25678; Mature: 25678
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDQRDTARVIVVGEALIDIVHRADGTVTETPGGSPANVALTLGRLGVPVRLVTQLADNA CCCCCCCCEEEEEHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCC GGRAVRAWLVESGAQVSAQIPDGGRTSTAIARLDATGAATYEFDVTWSITVPELGAVGAL CCHHHHHHHHHCCCEEEEECCCCCCCCHHEEEECCCCCEEEEEEEEEEEECCCCCCCCCE QVGSLGGLLVPDANAVASLVAAVGDALVSNDPGIRPSLIGDPVAARSRVERLVAAAAVVK EECCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC ASEGDLRWLYPLASPVHVARRWRAAGPALAQVLRRCAHNAAITVSRAGADPPWASEIETT CCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH CIDSLPATTNG HHHCCCCCCCC >Mature Secondary Structure MIDQRDTARVIVVGEALIDIVHRADGTVTETPGGSPANVALTLGRLGVPVRLVTQLADNA CCCCCCCCEEEEEHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCC GGRAVRAWLVESGAQVSAQIPDGGRTSTAIARLDATGAATYEFDVTWSITVPELGAVGAL CCHHHHHHHHHCCCEEEEECCCCCCCCHHEEEECCCCCEEEEEEEEEEEECCCCCCCCCE QVGSLGGLLVPDANAVASLVAAVGDALVSNDPGIRPSLIGDPVAARSRVERLVAAAAVVK EECCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC ASEGDLRWLYPLASPVHVARRWRAAGPALAQVLRRCAHNAAITVSRAGADPPWASEIETT CCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH CIDSLPATTNG HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1809835 [H]