| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is eda [H]
Identifier: 158318749
GI number: 158318749
Start: 8561905
End: 8562576
Strand: Reverse
Name: eda [H]
Synonym: Franean1_7020
Alternate gene names: 158318749
Gene position: 8562576-8561905 (Counterclockwise)
Preceding gene: 158318750
Following gene: 158318748
Centisome position: 95.33
GC content: 62.2
Gene sequence:
>672_bases ATGACCTCGATCTCACGCCCTTCGTCCCTGCTCAACATCGCGCCAGTGATACCCGTCGTCGTCGTGCATGACATCCGAAC AGCGGTGCCGCTCGCCCGTGCTCTCGTCGCTGGAGGCCTGCATATCCTGGAGGTGACACTACGCACCGACGCAGCCCTAC AGGCGATCGAGTTGATCACGGCGGAAGTGCCGGACATTCTCGTTGGCGCTGGAACGATCACCTCAAGCGATCAGGCAAGG CAGTCCGTGGACGCCGGCGCACACTTCCTGGTCAGCCCCGGATGCACCGACCGGCTGCTAGACGCGATGGACGACAGCGG CCTGCCTTATCTACCCGGTGTCGCTACCGTCTCGGAGATGCTTAAGGTTCTCGACCGCAGGAAGGTCGAGATGAAGTTCT TCCCCGCCGGGGCTGCAGGAGGCATCCCCTACCTCCAAGCGGTAGCGGGACCGCTACCACAAATCCGATTCTGCCCGACT GGCGGCATCACCGCTGCTACGGTTGGGGCCTATCTGGGCGAGCCAAATGTCGGATGCGTCGGCGGATCTTGGGTGACACC ACCCGATGCCATCTGGGAAGGCGATTGGAAACAGATCACGCAACTTGCCCGCGGCGTGGCATCATGGCCGAACCGAGACG GCATGGGCCATCGGTCAATGCCACTTAAGTAA
Upstream 100 bases:
>100_bases CCTCGGACACGGGGATAGGGACCGGACGCGAGCTCTTCGCTGCGTTCCGGAGCGTTGTCGGCCCAGCCGACTCCGGGGCC AGCGTGCTGACGGTAACGGC
Downstream 100 bases:
>100_bases GGCCGTTTATCGTGGAAGCGTCCCAACCCGCAGCCTTTCTGGCTGCCCAGCGGTCCCCGAATACTGTCGCGTCACCCCAG CCGATCGAGTCGCTTCCCTC
Product: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTSISRPSSLLNIAPVIPVVVVHDIRTAVPLARALVAGGLHILEVTLRTDAALQAIELITAEVPDILVGAGTITSSDQAR QSVDAGAHFLVSPGCTDRLLDAMDDSGLPYLPGVATVSEMLKVLDRRKVEMKFFPAGAAGGIPYLQAVAGPLPQIRFCPT GGITAATVGAYLGEPNVGCVGGSWVTPPDAIWEGDWKQITQLARGVASWPNRDGMGHRSMPLK
Sequences:
>Translated_223_residues MTSISRPSSLLNIAPVIPVVVVHDIRTAVPLARALVAGGLHILEVTLRTDAALQAIELITAEVPDILVGAGTITSSDQAR QSVDAGAHFLVSPGCTDRLLDAMDDSGLPYLPGVATVSEMLKVLDRRKVEMKFFPAGAAGGIPYLQAVAGPLPQIRFCPT GGITAATVGAYLGEPNVGCVGGSWVTPPDAIWEGDWKQITQLARGVASWPNRDGMGHRSMPLK >Mature_222_residues TSISRPSSLLNIAPVIPVVVVHDIRTAVPLARALVAGGLHILEVTLRTDAALQAIELITAEVPDILVGAGTITSSDQARQ SVDAGAHFLVSPGCTDRLLDAMDDSGLPYLPGVATVSEMLKVLDRRKVEMKFFPAGAAGGIPYLQAVAGPLPQIRFCPTG GITAATVGAYLGEPNVGCVGGSWVTPPDAIWEGDWKQITQLARGVASWPNRDGMGHRSMPLK
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=180, Percent_Identity=51.1111111111111, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 23351; Mature: 23220
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSISRPSSLLNIAPVIPVVVVHDIRTAVPLARALVAGGLHILEVTLRTDAALQAIELIT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHH AEVPDILVGAGTITSSDQARQSVDAGAHFLVSPGCTDRLLDAMDDSGLPYLPGVATVSEM HHCCHHEEECCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHH LKVLDRRKVEMKFFPAGAAGGIPYLQAVAGPLPQIRFCPTGGITAATVGAYLGEPNVGCV HHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCEE GGSWVTPPDAIWEGDWKQITQLARGVASWPNRDGMGHRSMPLK CCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TSISRPSSLLNIAPVIPVVVVHDIRTAVPLARALVAGGLHILEVTLRTDAALQAIELIT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHHHHH AEVPDILVGAGTITSSDQARQSVDAGAHFLVSPGCTDRLLDAMDDSGLPYLPGVATVSEM HHCCHHEEECCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHH LKVLDRRKVEMKFFPAGAAGGIPYLQAVAGPLPQIRFCPTGGITAATVGAYLGEPNVGCV HHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCEE GGSWVTPPDAIWEGDWKQITQLARGVASWPNRDGMGHRSMPLK CCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]