Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318711

Identifier: 158318711

GI number: 158318711

Start: 8503519

End: 8503929

Strand: Reverse

Name: 158318711

Synonym: Franean1_6980

Alternate gene names: NA

Gene position: 8503929-8503519 (Counterclockwise)

Preceding gene: 158318712

Following gene: 158318708

Centisome position: 94.68

GC content: 70.32

Gene sequence:

>411_bases
TTGCGTGCCTTCCGCACCGTTGACGACGCCGCCACCGTCGCGGCTGGCATGGTCGCGGCCGACTCTCGTCTCCAGGATAT
CTGGCGGTACGCCGTCGTCCAGCTGCTCGACGACTACACCAGCGTGCTACGTCACCAGGGCCTTGAAGCGGCGCAGGCAA
TGTGGACCGACCGTCCACGGTCGTCCGGCGACAGGCGAGTGGACGCCGCTCTCGCCGCGCTCGGGGAACACCTCGCCCGT
CGCGACGGCTGGCCTGCGCCCCAGTGGGTGCGCGATCCGGCGCTGGAGGCGGTGCCCTGGTGGTTCGTCACCGCGCTGAA
GGGCCTGCATCCCCGGGCGTTGGTCGAGTCCCCGCTGTCGTTTCGCAAGCGTGGCGTGTTCATCACCAGCGGTGCGCTCC
AGCGGGCGTGA

Upstream 100 bases:

>100_bases
GGCCGGCTGGTGCGCTGACCACGCGGCATGGGGCACGCCCGTAACCGTCGGCGACAGACTGAAGAGATGATCGACAGCGT
ACTGTGGGGGCGTGGACCCG

Downstream 100 bases:

>100_bases
CTGACCGGCCCGGGACTCAACCGTGAGTCGATCATCGACCTGCTCCAGGAGCTCAACGACGAACTGGGGCGGCGCGGCGC
CAAGGCCGACCTGTTCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRAFRTVDDAATVAAGMVAADSRLQDIWRYAVVQLLDDYTSVLRHQGLEAAQAMWTDRPRSSGDRRVDAALAALGEHLAR
RDGWPAPQWVRDPALEAVPWWFVTALKGLHPRALVESPLSFRKRGVFITSGALQRA

Sequences:

>Translated_136_residues
MRAFRTVDDAATVAAGMVAADSRLQDIWRYAVVQLLDDYTSVLRHQGLEAAQAMWTDRPRSSGDRRVDAALAALGEHLAR
RDGWPAPQWVRDPALEAVPWWFVTALKGLHPRALVESPLSFRKRGVFITSGALQRA
>Mature_136_residues
MRAFRTVDDAATVAAGMVAADSRLQDIWRYAVVQLLDDYTSVLRHQGLEAAQAMWTDRPRSSGDRRVDAALAALGEHLAR
RDGWPAPQWVRDPALEAVPWWFVTALKGLHPRALVESPLSFRKRGVFITSGALQRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15149; Mature: 15149

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFRTVDDAATVAAGMVAADSRLQDIWRYAVVQLLDDYTSVLRHQGLEAAQAMWTDRPR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
SSGDRRVDAALAALGEHLARRDGWPAPQWVRDPALEAVPWWFVTALKGLHPRALVESPLS
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCHH
FRKRGVFITSGALQRA
HHHCCCEEECCCHHCC
>Mature Secondary Structure
MRAFRTVDDAATVAAGMVAADSRLQDIWRYAVVQLLDDYTSVLRHQGLEAAQAMWTDRPR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
SSGDRRVDAALAALGEHLARRDGWPAPQWVRDPALEAVPWWFVTALKGLHPRALVESPLS
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCHH
FRKRGVFITSGALQRA
HHHCCCEEECCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA