| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is macB [H]
Identifier: 158318694
GI number: 158318694
Start: 8486462
End: 8487694
Strand: Reverse
Name: macB [H]
Synonym: Franean1_6962
Alternate gene names: 158318694
Gene position: 8487694-8486462 (Counterclockwise)
Preceding gene: 158318695
Following gene: 158318693
Centisome position: 94.5
GC content: 69.42
Gene sequence:
>1233_bases ATGGGGTGGCTCGAGACATTCCGTACCGGAGTGGACGCGATCCGTACCCACCGGCTGCGTTCCGGCCTGACGGTGCTCGG CATCCTGATCGGGATCGCCGCCGTGGTACTCACGGTGGGCCTCGGCGTGGGCGCCCAGGACAAGGTCGGATCGCAGATCA GCTCGCTGGGAAGCAACCTGCTGATCGTCTCGCCGGGCAGTTCGACCAGCTCCACCGGTGTGCGCGGCGGGTTCGGCTCC GCGTCGACGCTCACCGTCGCCGATGCGGCCGCGTTGGCCTCGAAGACCTCCGCGCCTGACATCGAGGGGGTCGCCCCGGT CAAACAGAGCTCGATGTCGGTGCTGAACGGTTCGGTGAACTGGACGACGACCGTGGTCGGCACGACCCCGTCCTGGCTGT CCGTCCGTAACCGTTCCATCAGCGCGGGCCGCTTCATCACCACGACGGACGACGCGCAGTCCGCGGCGGTCACCGTCCTC GCCGCGGACACGGCCACCGAGCTGTTCGGCCGGCGCAGCCCGGTCGGTCAGAGCGTGACGATCAACAACATCCCGTTCAC GGTTGTCGGAGTGCTCGTCTCGGCCGGCTCGGACAGTTCGAACAACCTCGACGACCAGGCGATCGTGCCGATGTCCACCG GGGCGAGCCGCCTGTTCGGCGGGACGACGCGCACCTCGGTCTCCTCGATCTACATCAGGGGGCATTCGGCGTCCACCCTG TCGGCGGCCTACCAGGAGGCGACGAGTCTGCTCCTGAACCAGCACGGCATCACGGACTCGTCCAGCGCGGACTTCACGAT CACCACCCAGGAGTCCCTGCTGAGCACGGCGACGTCCGTGAGCCGGACGCTCACCGCCCTGCTGGCCGGGATCGCAGCGC TGTCGCTGCTGGTGGGTGGGATCGGCGTCATGAACATCATGCTTGTCTCGGTGACCGAGCGCACCCGCGAGATCGGGCTG CGCAAGGCGCTGGGCGCGCCACCCGCGGCGATCCGGCGGCAGTTCCTCATCGAGGCGTCGCTGCTCAGCCTCGCCGGAGG AGCGATCGGCGCGCTGCTGGGCATCAGCGGCGCCCTGGTGCTGCCCCAGTTCATCGACAACCCGGTGGCGATCGTCTGGT GGGCTGTGCTCGGCTCGTTGGCCGTCGCGGTCGCGATCGGCGTCGCCTTCGGCGTGTACCCCGCCAGCCGGGCCGCCCGG CTGGCTCCCATCGACGCGCTCCGCAGCGACTAG
Upstream 100 bases:
>100_bases GCCGGGTCGTGCGGATCCGGGACGGGCTGATCGAGTCCGACACCGCGGCCGGCTCACCGGCTCTCCCGGCCCCCTCGGCG GCCGAGGCGGCGACCCGCTG
Downstream 100 bases:
>100_bases CCCCCATGACGAGGACGAACATCATGACTGGCCAGGTTCCGCTTTCCATGTCACCGATCGGCGTCCACCCGGCGCGACGC TCCGCGGCCGTGGCTGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGWLETFRTGVDAIRTHRLRSGLTVLGILIGIAAVVLTVGLGVGAQDKVGSQISSLGSNLLIVSPGSSTSSTGVRGGFGS ASTLTVADAAALASKTSAPDIEGVAPVKQSSMSVLNGSVNWTTTVVGTTPSWLSVRNRSISAGRFITTTDDAQSAAVTVL AADTATELFGRRSPVGQSVTINNIPFTVVGVLVSAGSDSSNNLDDQAIVPMSTGASRLFGGTTRTSVSSIYIRGHSASTL SAAYQEATSLLLNQHGITDSSSADFTITTQESLLSTATSVSRTLTALLAGIAALSLLVGGIGVMNIMLVSVTERTREIGL RKALGAPPAAIRRQFLIEASLLSLAGGAIGALLGISGALVLPQFIDNPVAIVWWAVLGSLAVAVAIGVAFGVYPASRAAR LAPIDALRSD
Sequences:
>Translated_410_residues MGWLETFRTGVDAIRTHRLRSGLTVLGILIGIAAVVLTVGLGVGAQDKVGSQISSLGSNLLIVSPGSSTSSTGVRGGFGS ASTLTVADAAALASKTSAPDIEGVAPVKQSSMSVLNGSVNWTTTVVGTTPSWLSVRNRSISAGRFITTTDDAQSAAVTVL AADTATELFGRRSPVGQSVTINNIPFTVVGVLVSAGSDSSNNLDDQAIVPMSTGASRLFGGTTRTSVSSIYIRGHSASTL SAAYQEATSLLLNQHGITDSSSADFTITTQESLLSTATSVSRTLTALLAGIAALSLLVGGIGVMNIMLVSVTERTREIGL RKALGAPPAAIRRQFLIEASLLSLAGGAIGALLGISGALVLPQFIDNPVAIVWWAVLGSLAVAVAIGVAFGVYPASRAAR LAPIDALRSD >Mature_409_residues GWLETFRTGVDAIRTHRLRSGLTVLGILIGIAAVVLTVGLGVGAQDKVGSQISSLGSNLLIVSPGSSTSSTGVRGGFGSA STLTVADAAALASKTSAPDIEGVAPVKQSSMSVLNGSVNWTTTVVGTTPSWLSVRNRSISAGRFITTTDDAQSAAVTVLA ADTATELFGRRSPVGQSVTINNIPFTVVGVLVSAGSDSSNNLDDQAIVPMSTGASRLFGGTTRTSVSSIYIRGHSASTLS AAYQEATSLLLNQHGITDSSSADFTITTQESLLSTATSVSRTLTALLAGIAALSLLVGGIGVMNIMLVSVTERTREIGLR KALGAPPAAIRRQFLIEASLLSLAGGAIGALLGISGALVLPQFIDNPVAIVWWAVLGSLAVAVAIGVAFGVYPASRAARL APIDALRSD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=408, Percent_Identity=32.843137254902, Blast_Score=167, Evalue=8e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 41603; Mature: 41472
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWLETFRTGVDAIRTHRLRSGLTVLGILIGIAAVVLTVGLGVGAQDKVGSQISSLGSNL CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCE LIVSPGSSTSSTGVRGGFGSASTLTVADAAALASKTSAPDIEGVAPVKQSSMSVLNGSVN EEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC WTTTVVGTTPSWLSVRNRSISAGRFITTTDDAQSAAVTVLAADTATELFGRRSPVGQSVT EEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHHCCCCCCCCEEE INNIPFTVVGVLVSAGSDSSNNLDDQAIVPMSTGASRLFGGTTRTSVSSIYIRGHSASTL ECCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCEEEEEEEECCCCHHH SAAYQEATSLLLNQHGITDSSSADFTITTQESLLSTATSVSRTLTALLAGIAALSLLVGG HHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVMNIMLVSVTERTREIGLRKALGAPPAAIRRQFLIEASLLSLAGGAIGALLGISGALV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC LPQFIDNPVAIVWWAVLGSLAVAVAIGVAFGVYPASRAARLAPIDALRSD CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC >Mature Secondary Structure GWLETFRTGVDAIRTHRLRSGLTVLGILIGIAAVVLTVGLGVGAQDKVGSQISSLGSNL CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCE LIVSPGSSTSSTGVRGGFGSASTLTVADAAALASKTSAPDIEGVAPVKQSSMSVLNGSVN EEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC WTTTVVGTTPSWLSVRNRSISAGRFITTTDDAQSAAVTVLAADTATELFGRRSPVGQSVT EEEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHHCCCCCCCCEEE INNIPFTVVGVLVSAGSDSSNNLDDQAIVPMSTGASRLFGGTTRTSVSSIYIRGHSASTL ECCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCEEEEEEEECCCCHHH SAAYQEATSLLLNQHGITDSSSADFTITTQESLLSTATSVSRTLTALLAGIAALSLLVGG HHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVMNIMLVSVTERTREIGLRKALGAPPAAIRRQFLIEASLLSLAGGAIGALLGISGALV HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC LPQFIDNPVAIVWWAVLGSLAVAVAIGVAFGVYPASRAARLAPIDALRSD CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA