| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318686
Identifier: 158318686
GI number: 158318686
Start: 8471885
End: 8473405
Strand: Direct
Name: 158318686
Synonym: Franean1_6954
Alternate gene names: NA
Gene position: 8471885-8473405 (Clockwise)
Preceding gene: 158318685
Following gene: 158318687
Centisome position: 94.32
GC content: 66.27
Gene sequence:
>1521_bases ATGACAGCATCGGCATCCTTCGACACTGCCACGACCGCTGCTATCGCGGTCATTCGCTCGGAGCTGGAGGACCGTATCGC AGGAATACTGCACGGCTGTCGCGAACTACACGGCGACAGCAGCCGTCGCCTTCTTCTCTCCCAGGTCGAACGGCATTCCG GCGTCGCGATCCCGATTGCCGAGTACCCCAGCTCCCGCCAGTGGTTCATAGGGTTCGTCGAGGCATGCTGCGGCACGCCG GCCGGCATCCGGGCCATCATCGCCGTCGCCCGTGTGTTCGGACTCGGCCCCGCGGTCACCGTCCCGCTCACCTGCCTCCA CGACGAGTGGGATGCCGCACCCACAGCCGTCGACGCGGGAGAGGATCTGTGGACCAGGCTCAGATCCGAGCTCACGGCGA CGACCCGGGCCGCGGCCGTCGCCGCCTGCCGGCTCTCACCCCAGGCGGGGCTGTCGCTCCCGCCGGCGCACTGCTCCAAC GGCTGGCTGGTGCTGCTGCATCTCGCCGGCCGCAACGCCGGCCCGGACGGGCTGCCGGTCTACATCTCCTATCTCGAAGG CATTCTCGACCAGCTCTCACCCGAGACGCGCGCCATGGTCGAGCACTGGAACCAACGCCGCGCCTACGAGCTGGGGCTGA CCGGCAAACTCAACGACACACGGCTCCGGAGGGGTGCCCGCGCCACCGCGGCACGGCAGAATGTGCATGTCATTCTGCAG TTTGAGCTGGACCACCTGGACCCGTCGACGCACCTGGTCTCCTGGTGGCGACAATGGGACGAGGAGTCGGCGGTTTTCGA ACGAGGTGCCCGATTTTTTCCCGTCCCGTTGGGCGACCTGGAGATGTTCACCGAAAAAGTCGTGACCGACACCGAGGCTC TCCTCTCGGAGCGGGAGGACCAGATAATTCTTGAATTCGTCCTCCCCATCGACCTGATGCACCTTCCCGTCGAACGCTGG CCGAAGGAAAGCGGTTCGGTCCTGCCGAAGCAGCTCGGTTGCGACTATCCCGTCGTGGTGCGAAGCCTGGAGCGGGTACA CAACCCGCACTGGCGGCGGGCGTGGCGCATACGGTGGCGTATCCTGCACGAGAAGCAGGATTCGGCGAGCACGTGGCAGA TCAGGGACGACGGAGACGGCTACATCCAAAGGCTCGATGCCGACCTTCTCTCCGACGAGAACCTGGTGGCCGCGGTCCTC AGCGGCGCTCCCGCGCCGGCCCGCGCCACCGCGGCCGAACTGGAGATCGTCCTGCGCTGTGGCCTGCCCGTGATTCTGTG GCACCGTGACGGCACCGCGGCCCCGACGGTTTCCGACGCGGTGAAGGAGTTCGTCGATCTCGGCGGCCCGGCCGATCTCC GAGCGCGTACCCACCGGCTCCGACTCGACGCCGCACGCTCGGAAGTTTCAAAAGGCGATCATCTCGGGCACAATCTCGTT ATTTTATGGGATGACCCGAACCGGCGGCCGGAGAGGGGTCCAGACGATTCCCTCTCCGTCGGAGGAGAGGTGCAGCAGTG A
Upstream 100 bases:
>100_bases GCTTTCCCGGTAACCGTTACCTGCGCAACGGACGCCCGTGAACCACGCGGAACGGCGGTCACCGGGTAACTTCCGTCCGT CCGGTCGCTAAGGGTACGCG
Downstream 100 bases:
>100_bases ACAGCGACGGTGGGGGCACCGCACGAGGCCGGCAGTCGGAGAGCTGGTGGCTTTTCCACGGCACGGGGGAACCGGCGGAC GTGGCCGCGCTTCACACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MTASASFDTATTAAIAVIRSELEDRIAGILHGCRELHGDSSRRLLLSQVERHSGVAIPIAEYPSSRQWFIGFVEACCGTP AGIRAIIAVARVFGLGPAVTVPLTCLHDEWDAAPTAVDAGEDLWTRLRSELTATTRAAAVAACRLSPQAGLSLPPAHCSN GWLVLLHLAGRNAGPDGLPVYISYLEGILDQLSPETRAMVEHWNQRRAYELGLTGKLNDTRLRRGARATAARQNVHVILQ FELDHLDPSTHLVSWWRQWDEESAVFERGARFFPVPLGDLEMFTEKVVTDTEALLSEREDQIILEFVLPIDLMHLPVERW PKESGSVLPKQLGCDYPVVVRSLERVHNPHWRRAWRIRWRILHEKQDSASTWQIRDDGDGYIQRLDADLLSDENLVAAVL SGAPAPARATAAELEIVLRCGLPVILWHRDGTAAPTVSDAVKEFVDLGGPADLRARTHRLRLDAARSEVSKGDHLGHNLV ILWDDPNRRPERGPDDSLSVGGEVQQ
Sequences:
>Translated_506_residues MTASASFDTATTAAIAVIRSELEDRIAGILHGCRELHGDSSRRLLLSQVERHSGVAIPIAEYPSSRQWFIGFVEACCGTP AGIRAIIAVARVFGLGPAVTVPLTCLHDEWDAAPTAVDAGEDLWTRLRSELTATTRAAAVAACRLSPQAGLSLPPAHCSN GWLVLLHLAGRNAGPDGLPVYISYLEGILDQLSPETRAMVEHWNQRRAYELGLTGKLNDTRLRRGARATAARQNVHVILQ FELDHLDPSTHLVSWWRQWDEESAVFERGARFFPVPLGDLEMFTEKVVTDTEALLSEREDQIILEFVLPIDLMHLPVERW PKESGSVLPKQLGCDYPVVVRSLERVHNPHWRRAWRIRWRILHEKQDSASTWQIRDDGDGYIQRLDADLLSDENLVAAVL SGAPAPARATAAELEIVLRCGLPVILWHRDGTAAPTVSDAVKEFVDLGGPADLRARTHRLRLDAARSEVSKGDHLGHNLV ILWDDPNRRPERGPDDSLSVGGEVQQ >Mature_505_residues TASASFDTATTAAIAVIRSELEDRIAGILHGCRELHGDSSRRLLLSQVERHSGVAIPIAEYPSSRQWFIGFVEACCGTPA GIRAIIAVARVFGLGPAVTVPLTCLHDEWDAAPTAVDAGEDLWTRLRSELTATTRAAAVAACRLSPQAGLSLPPAHCSNG WLVLLHLAGRNAGPDGLPVYISYLEGILDQLSPETRAMVEHWNQRRAYELGLTGKLNDTRLRRGARATAARQNVHVILQF ELDHLDPSTHLVSWWRQWDEESAVFERGARFFPVPLGDLEMFTEKVVTDTEALLSEREDQIILEFVLPIDLMHLPVERWP KESGSVLPKQLGCDYPVVVRSLERVHNPHWRRAWRIRWRILHEKQDSASTWQIRDDGDGYIQRLDADLLSDENLVAAVLS GAPAPARATAAELEIVLRCGLPVILWHRDGTAAPTVSDAVKEFVDLGGPADLRARTHRLRLDAARSEVSKGDHLGHNLVI LWDDPNRRPERGPDDSLSVGGEVQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56013; Mature: 55882
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASASFDTATTAAIAVIRSELEDRIAGILHGCRELHGDSSRRLLLSQVERHSGVAIPIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEHH EYPSSRQWFIGFVEACCGTPAGIRAIIAVARVFGLGPAVTVPLTCLHDEWDAAPTAVDAG CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC EDLWTRLRSELTATTRAAAVAACRLSPQAGLSLPPAHCSNGWLVLLHLAGRNAGPDGLPV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH YISYLEGILDQLSPETRAMVEHWNQRRAYELGLTGKLNDTRLRRGARATAARQNVHVILQ HHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCCCHHHHHCCCEEEEEE FELDHLDPSTHLVSWWRQWDEESAVFERGARFFPVPLGDLEMFTEKVVTDTEALLSERED EEECCCCCHHHHHHHHHHHCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCC QIILEFVLPIDLMHLPVERWPKESGSVLPKQLGCDYPVVVRSLERVHNPHWRRAWRIRWR CEEHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH ILHEKQDSASTWQIRDDGDGYIQRLDADLLSDENLVAAVLSGAPAPARATAAELEIVLRC EEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC GLPVILWHRDGTAAPTVSDAVKEFVDLGGPADLRARTHRLRLDAARSEVSKGDHLGHNLV CCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE ILWDDPNRRPERGPDDSLSVGGEVQQ EEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TASASFDTATTAAIAVIRSELEDRIAGILHGCRELHGDSSRRLLLSQVERHSGVAIPIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEHH EYPSSRQWFIGFVEACCGTPAGIRAIIAVARVFGLGPAVTVPLTCLHDEWDAAPTAVDAG CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCC EDLWTRLRSELTATTRAAAVAACRLSPQAGLSLPPAHCSNGWLVLLHLAGRNAGPDGLPV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHH YISYLEGILDQLSPETRAMVEHWNQRRAYELGLTGKLNDTRLRRGARATAARQNVHVILQ HHHHHHHHHHHCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCCCHHHHHCCCEEEEEE FELDHLDPSTHLVSWWRQWDEESAVFERGARFFPVPLGDLEMFTEKVVTDTEALLSERED EEECCCCCHHHHHHHHHHHCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCC QIILEFVLPIDLMHLPVERWPKESGSVLPKQLGCDYPVVVRSLERVHNPHWRRAWRIRWR CEEHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH ILHEKQDSASTWQIRDDGDGYIQRLDADLLSDENLVAAVLSGAPAPARATAAELEIVLRC EEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC GLPVILWHRDGTAAPTVSDAVKEFVDLGGPADLRARTHRLRLDAARSEVSKGDHLGHNLV CCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE ILWDDPNRRPERGPDDSLSVGGEVQQ EEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA