| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318639
Identifier: 158318639
GI number: 158318639
Start: 8414705
End: 8414965
Strand: Direct
Name: 158318639
Synonym: Franean1_6907
Alternate gene names: NA
Gene position: 8414705-8414965 (Clockwise)
Preceding gene: 158318637
Following gene: 158318641
Centisome position: 93.68
GC content: 64.75
Gene sequence:
>261_bases TTGTTCATCGAACCGATACAGAAGAGCGTCCGCGGAGTGTTGGCCTTCCCGGCCGCCAACCCGGCCAGCACGGCTCCTCC CAGGAAGGATCTTCTGTACATCATCGAGCTCGCGGGCACACTGAACGGAATGCTCGACCGCATCCAGCGGAGCCTGGTCG AACGTGATCGCGCGCTGGACAGCCAGCGGATGTTCACCGCCAACGCCGCGCACGAGCTGCGGACCCCGCTCACGAGACCA TGCGCACCGCCATCGACGTGA
Upstream 100 bases:
>100_bases CCCGTTGACGTCGACGGGACGGCGCGAGCGAACGACGGTGTCGTCGAACGACAGCCTGCCCCGCCCCACGAGCTGAGCCA CAGCCACACCAGTGAGCATC
Downstream 100 bases:
>100_bases CACTGGACGGCGATCCGGACACAGCGGAGCTGCGGGCGATGGCCGACGACATCCGGGCCGCGGTCGAGCACAGCCAGCGC ACCCTGGACGGGCTGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Two-Component System Histidine Kinase
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MFIEPIQKSVRGVLAFPAANPASTAPPRKDLLYIIELAGTLNGMLDRIQRSLVERDRALDSQRMFTANAAHELRTPLTRP CAPPST
Sequences:
>Translated_86_residues MFIEPIQKSVRGVLAFPAANPASTAPPRKDLLYIIELAGTLNGMLDRIQRSLVERDRALDSQRMFTANAAHELRTPLTRP CAPPST >Mature_86_residues MFIEPIQKSVRGVLAFPAANPASTAPPRKDLLYIIELAGTLNGMLDRIQRSLVERDRALDSQRMFTANAAHELRTPLTRP CAPPST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9486; Mature: 9486
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIEPIQKSVRGVLAFPAANPASTAPPRKDLLYIIELAGTLNGMLDRIQRSLVERDRALD CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SQRMFTANAAHELRTPLTRPCAPPST HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MFIEPIQKSVRGVLAFPAANPASTAPPRKDLLYIIELAGTLNGMLDRIQRSLVERDRALD CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SQRMFTANAAHELRTPLTRPCAPPST HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA