| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318619
Identifier: 158318619
GI number: 158318619
Start: 8390780
End: 8392354
Strand: Reverse
Name: 158318619
Synonym: Franean1_6887
Alternate gene names: NA
Gene position: 8392354-8390780 (Counterclockwise)
Preceding gene: 158318622
Following gene: 158318613
Centisome position: 93.43
GC content: 71.62
Gene sequence:
>1575_bases ATGGCCAGGTCCTTTTCCGAATCCGAGCTAGTTGAACTGGCGACGGTCTACCACGAGAAGCGTTCCGCCAGATCACTGCT GGAGCGCGCGGGTATCGACCCCGGAAGCCATCCCAGCTGGGACAGCCTCACCTCCCTGGACTTCTGGCGGGCGGTGGGTG CGCAGGTCACGTCGGGCTGGGGCGGGTCGGACACCGCCGACCGAATCCTGGCCGCCGCGGCCAGGGATTATGTCGGCAAC GACGTCTTCCGCCGGCCGGCCGGCGGCCCGCCGCACGGCTCCCCGGTCCCGGCTTCGGCCCCAGCCCCGGTTTCGGCCGC GGCCGGGAGCGCCGCCGCTGTGTCGGGCGCCTCCGCCGGGGGTGGCCGGGCCGCCGAGCCCTTCGGGAGATCCGGCCCGC CCGGCTCACCCGATCCGCTCTCCGTCCTGGGGACGATTGTCGTGGTCGACGCGGTGGGGTTCAGCAAGAACGGGGCGCTC GTCCATCTGGAGTGGCGCAAGGGCATCAGCGCCATCACGGCACGGGCTGCCGCTGCCGTCGGTATCCCGCCAGGTCTCAT GCACTTCAACGACCGCGGCGACGGATTCATGCTGATCATCGACGGCCGGGTACCCCCTGAGACGGTGGTCGCCGACTTCA CCCGGGAGCTGGGGATCGCCCTCGGCGAGTACAACCGCACACGCAACAGCGCCGGCCGGATCCGGCTGCGCATCGCGATG CACGAGGGCCGGGCGTTCGTGGACGGCACGGGCCTCACCGGCACGCCCGCGATCGTCGCGGCGAGACTGGTCGACGCCGA GGAGTTGCGCGACGTCCTCCGGAGGTCCGACGGCCCGGACAGCGCCCTGATCGTCTCGGATGTGCTCTACCAGTCCACGG TCATCGAGCGGCTGCGCGGGCTCGACCCGGAGGACTTCGTCCGGGTCGCGGTCACGATGGCGAAGTACGACGGTGTCGCG TGGATCGCGGGACGCGAGAACGCCGACGCTGCTCAGCCGGGCGGTTCGGGCGAAACCGCCCGGACGGCGCCCGAGTCGCT ATCCGCACCCTCGCCGGCGACCGGCAGGTGGGACTTCCTGATCTCGTGCACGGCCGCCGACGAGGACTGGGGCCAGTGGA TCGCCCATCAGCTCAAGACCGCGAAGTACGAGGTGCACCTGGACGCCTTCGACATGGTGGCGGGCAGGGGACGCGTCGCG GAGTGGCACGACGCGGTCCGGTACTCGACCCGGACGATCGCGGTGCTGAGCGAGAACTACCTGACCGCGGCCAGGGAGAT CCAGGCCCAGTGGCAGGCGGCCTGGGAGGGCGATGGCACCGGCGCCGGGAACAACTCGGCCGGCGACGGAGGCGGCAAGG GCGGGGAAGGCGGGGTCGAGCGTCGGTTGATCCCGGTGGTGGTCCGGCCGTGCTACCCGGACGGCCTGCTCAAGGGCATC ACGCCGATCGACCTGACCAGACTGCGGGACGACCGGGATGCCGCCCGCGACCATCTTCTGGAGGAGGTCGCGGCCTCGCT GAGCGGGCGGCGCAGGCGCTCGGAGGACCCGCCCCCGTTCCCGGGAGAAAGCTGA
Upstream 100 bases:
>100_bases TTGTGGTCGACGCCGGTCGGCGGGCAGCACGGAGGGCCCGCGTGGGCGTCGGAATGCATCAGGCACCGGCATACGATGCA CGAGCCGGACGGGGGAGTCC
Downstream 100 bases:
>100_bases CCGTTCCGGGTGGTGCTGACCACCGGTTCCGGGTGGTTCAGTGCCAGCCGAGTTCGTCCAGGCGGTCGTCGCCTATACCG AAGTGGTGCGCGATCTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MARSFSESELVELATVYHEKRSARSLLERAGIDPGSHPSWDSLTSLDFWRAVGAQVTSGWGGSDTADRILAAAARDYVGN DVFRRPAGGPPHGSPVPASAPAPVSAAAGSAAAVSGASAGGGRAAEPFGRSGPPGSPDPLSVLGTIVVVDAVGFSKNGAL VHLEWRKGISAITARAAAAVGIPPGLMHFNDRGDGFMLIIDGRVPPETVVADFTRELGIALGEYNRTRNSAGRIRLRIAM HEGRAFVDGTGLTGTPAIVAARLVDAEELRDVLRRSDGPDSALIVSDVLYQSTVIERLRGLDPEDFVRVAVTMAKYDGVA WIAGRENADAAQPGGSGETARTAPESLSAPSPATGRWDFLISCTAADEDWGQWIAHQLKTAKYEVHLDAFDMVAGRGRVA EWHDAVRYSTRTIAVLSENYLTAAREIQAQWQAAWEGDGTGAGNNSAGDGGGKGGEGGVERRLIPVVVRPCYPDGLLKGI TPIDLTRLRDDRDAARDHLLEEVAASLSGRRRRSEDPPPFPGES
Sequences:
>Translated_524_residues MARSFSESELVELATVYHEKRSARSLLERAGIDPGSHPSWDSLTSLDFWRAVGAQVTSGWGGSDTADRILAAAARDYVGN DVFRRPAGGPPHGSPVPASAPAPVSAAAGSAAAVSGASAGGGRAAEPFGRSGPPGSPDPLSVLGTIVVVDAVGFSKNGAL VHLEWRKGISAITARAAAAVGIPPGLMHFNDRGDGFMLIIDGRVPPETVVADFTRELGIALGEYNRTRNSAGRIRLRIAM HEGRAFVDGTGLTGTPAIVAARLVDAEELRDVLRRSDGPDSALIVSDVLYQSTVIERLRGLDPEDFVRVAVTMAKYDGVA WIAGRENADAAQPGGSGETARTAPESLSAPSPATGRWDFLISCTAADEDWGQWIAHQLKTAKYEVHLDAFDMVAGRGRVA EWHDAVRYSTRTIAVLSENYLTAAREIQAQWQAAWEGDGTGAGNNSAGDGGGKGGEGGVERRLIPVVVRPCYPDGLLKGI TPIDLTRLRDDRDAARDHLLEEVAASLSGRRRRSEDPPPFPGES >Mature_523_residues ARSFSESELVELATVYHEKRSARSLLERAGIDPGSHPSWDSLTSLDFWRAVGAQVTSGWGGSDTADRILAAAARDYVGND VFRRPAGGPPHGSPVPASAPAPVSAAAGSAAAVSGASAGGGRAAEPFGRSGPPGSPDPLSVLGTIVVVDAVGFSKNGALV HLEWRKGISAITARAAAAVGIPPGLMHFNDRGDGFMLIIDGRVPPETVVADFTRELGIALGEYNRTRNSAGRIRLRIAMH EGRAFVDGTGLTGTPAIVAARLVDAEELRDVLRRSDGPDSALIVSDVLYQSTVIERLRGLDPEDFVRVAVTMAKYDGVAW IAGRENADAAQPGGSGETARTAPESLSAPSPATGRWDFLISCTAADEDWGQWIAHQLKTAKYEVHLDAFDMVAGRGRVAE WHDAVRYSTRTIAVLSENYLTAAREIQAQWQAAWEGDGTGAGNNSAGDGGGKGGEGGVERRLIPVVVRPCYPDGLLKGIT PIDLTRLRDDRDAARDHLLEEVAASLSGRRRRSEDPPPFPGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55258; Mature: 55127
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSFSESELVELATVYHEKRSARSLLERAGIDPGSHPSWDSLTSLDFWRAVGAQVTSGW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHCCCC GGSDTADRILAAAARDYVGNDVFRRPAGGPPHGSPVPASAPAPVSAAAGSAAAVSGASAG CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCC GGRAAEPFGRSGPPGSPDPLSVLGTIVVVDAVGFSKNGALVHLEWRKGISAITARAAAAV CCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEHHCCHHHHHHHHHHHC GIPPGLMHFNDRGDGFMLIIDGRVPPETVVADFTRELGIALGEYNRTRNSAGRIRLRIAM CCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE HEGRAFVDGTGLTGTPAIVAARLVDAEELRDVLRRSDGPDSALIVSDVLYQSTVIERLRG ECCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC LDPEDFVRVAVTMAKYDGVAWIAGRENADAAQPGGSGETARTAPESLSAPSPATGRWDFL CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEE ISCTAADEDWGQWIAHQLKTAKYEVHLDAFDMVAGRGRVAEWHDAVRYSTRTIAVLSENY EEEECCCCHHHHHHHHHHHHCEEEEEECHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCH LTAAREIQAQWQAAWEGDGTGAGNNSAGDGGGKGGEGGVERRLIPVVVRPCYPDGLLKGI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCC TPIDLTRLRDDRDAARDHLLEEVAASLSGRRRRSEDPPPFPGES CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ARSFSESELVELATVYHEKRSARSLLERAGIDPGSHPSWDSLTSLDFWRAVGAQVTSGW CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHCCCC GGSDTADRILAAAARDYVGNDVFRRPAGGPPHGSPVPASAPAPVSAAAGSAAAVSGASAG CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCC GGRAAEPFGRSGPPGSPDPLSVLGTIVVVDAVGFSKNGALVHLEWRKGISAITARAAAAV CCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEHHCCHHHHHHHHHHHC GIPPGLMHFNDRGDGFMLIIDGRVPPETVVADFTRELGIALGEYNRTRNSAGRIRLRIAM CCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE HEGRAFVDGTGLTGTPAIVAARLVDAEELRDVLRRSDGPDSALIVSDVLYQSTVIERLRG ECCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC LDPEDFVRVAVTMAKYDGVAWIAGRENADAAQPGGSGETARTAPESLSAPSPATGRWDFL CCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEE ISCTAADEDWGQWIAHQLKTAKYEVHLDAFDMVAGRGRVAEWHDAVRYSTRTIAVLSENY EEEECCCCHHHHHHHHHHHHCEEEEEECHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCH LTAAREIQAQWQAAWEGDGTGAGNNSAGDGGGKGGEGGVERRLIPVVVRPCYPDGLLKGI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCC TPIDLTRLRDDRDAARDHLLEEVAASLSGRRRRSEDPPPFPGES CCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA