| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318549
Identifier: 158318549
GI number: 158318549
Start: 8306190
End: 8306387
Strand: Direct
Name: 158318549
Synonym: Franean1_6817
Alternate gene names: NA
Gene position: 8306190-8306387 (Clockwise)
Preceding gene: 158318548
Following gene: 158318550
Centisome position: 92.48
GC content: 72.73
Gene sequence:
>198_bases GTGAGCATCGACGGCGACGTTATCCGGCTCGGCCAGTTCCTCAAGCTCGCCGACGTCGTCGAGGCGGGTTCGGCCGTCAA GGCGGTGCTGGCCAGCGGGAGCGTCAGCGTCAACGGCGAGGTCGAGACCCGCCGGGGCCGCCAGCTGCGGCCAGGCGACG AGGTGACGCTGCCCGGCGAGCAGCTGCGCGTCGGCTGA
Upstream 100 bases:
>100_bases TACGACCCAGCTGCGGGCCCCGTCCGGTCGTCGACCGCGGCGTCCCGCCAGCCAGTCCGGTCGGCGGTCGACGGTCGGGC ATGCTGAGGGAATGCGTGAA
Downstream 100 bases:
>100_bases TCCATCCCCGGCGCGACCCCGGCGCGGCCTGTTCGGATCGGCTGGCGCGCCCCGTCGATGCCGGTCGTCAGGGCCCCGCG CCGGTGACAGACCCTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSIDGDVIRLGQFLKLADVVEAGSAVKAVLASGSVSVNGEVETRRGRQLRPGDEVTLPGEQLRVG
Sequences:
>Translated_65_residues MSIDGDVIRLGQFLKLADVVEAGSAVKAVLASGSVSVNGEVETRRGRQLRPGDEVTLPGEQLRVG >Mature_64_residues SIDGDVIRLGQFLKLADVVEAGSAVKAVLASGSVSVNGEVETRRGRQLRPGDEVTLPGEQLRVG
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6805; Mature: 6674
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDGDVIRLGQFLKLADVVEAGSAVKAVLASGSVSVNGEVETRRGRQLRPGDEVTLPGE CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCEECCCCCCCCCCCCEECCCC QLRVG EEECC >Mature Secondary Structure SIDGDVIRLGQFLKLADVVEAGSAVKAVLASGSVSVNGEVETRRGRQLRPGDEVTLPGE CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCEECCCCCCCCCCCCEECCCC QLRVG EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA