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The map label for this gene is ucpA [C]

Identifier: 158318542

GI number: 158318542

Start: 8301241

End: 8301750

Strand: Direct

Name: ucpA [C]

Synonym: Franean1_6810

Alternate gene names: 158318542

Gene position: 8301241-8301750 (Clockwise)

Preceding gene: 158318541

Following gene: 158318543

Centisome position: 92.42

GC content: 68.43

Gene sequence:

>510_bases
ATGGCTCAACGACTCCAGAACAGGACCGCGCTCGTCACCGGTTCCACGAGCAACATCGACCGGGCCATCGCCGTGGCGTT
CGCCGCTGAAGGGGCCCACGTCGTCGTCTCCGGTCGGGAGGAGGCGACCCGCCGCCTCGGCGGCCGTCTCGACATTCTCG
TCAACAACGCCGGCATCTTTCCCCCGAACACCACGCTGACCACCGACGATCGCACCTTCGATCAGGTTTACGCCGTCAAC
GTCAAGGCTCCGTTCTTCCTCACCCAGGCCGTGGCCCCCGCCATGGTCGCCGCGGGCGAGGGCGTGATCATCAACCTCGG
TTCCTGGGTCGCACGGCTGGGCCTGCCGGTGGGCTCGCTCTACAGCTCCACGAAAGGAGCGCTGGAGACGCTCACCCGGG
CCTGGGCCGCCGAGTTCGGACCGCTGGGTGTGCGCGTCAACGCCGTCTCGCCCGGCGTTATCCGCACCCTGACCTGGACA
CCGCCGTCGAGCATCCGGCCGAGGCCATGA

Upstream 100 bases:

>100_bases
GAGCGTCTCTGTGGGGACGGCAGCGGCGCCTGATACCCGCGACGGGTGTCGACGATTCTGGACTTGCGGGTCCAAAAATT
GCTGCCTAGCCTCCCCGGGC

Downstream 100 bases:

>100_bases
TGCGGGGTCCTCCCGCCGGCGGCTCCGGTCATCCCGACGCGATCGCAGCCGCGGCCGTCTACCTCGCCTCGGACGACGCG
GCGTTCATCCACGGAACGGT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MAQRLQNRTALVTGSTSNIDRAIAVAFAAEGAHVVVSGREEATRRLGGRLDILVNNAGIFPPNTTLTTDDRTFDQVYAVN
VKAPFFLTQAVAPAMVAAGEGVIINLGSWVARLGLPVGSLYSSTKGALETLTRAWAAEFGPLGVRVNAVSPGVIRTLTWT
PPSSIRPRP

Sequences:

>Translated_169_residues
MAQRLQNRTALVTGSTSNIDRAIAVAFAAEGAHVVVSGREEATRRLGGRLDILVNNAGIFPPNTTLTTDDRTFDQVYAVN
VKAPFFLTQAVAPAMVAAGEGVIINLGSWVARLGLPVGSLYSSTKGALETLTRAWAAEFGPLGVRVNAVSPGVIRTLTWT
PPSSIRPRP
>Mature_168_residues
AQRLQNRTALVTGSTSNIDRAIAVAFAAEGAHVVVSGREEATRRLGGRLDILVNNAGIFPPNTTLTTDDRTFDQVYAVNV
KAPFFLTQAVAPAMVAAGEGVIINLGSWVARLGLPVGSLYSSTKGALETLTRAWAAEFGPLGVRVNAVSPGVIRTLTWTP
PSSIRPRP

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=198, Percent_Identity=33.8383838383838, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI32483357, Length=188, Percent_Identity=34.5744680851064, Blast_Score=87, Evalue=5e-18,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=34.3915343915344, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI5031737, Length=189, Percent_Identity=34.3915343915344, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI15277342, Length=214, Percent_Identity=32.7102803738318, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI59889578, Length=130, Percent_Identity=37.6923076923077, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI66933014, Length=180, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=32.0855614973262, Blast_Score=71, Evalue=5e-13,
Organism=Escherichia coli, GI87082100, Length=188, Percent_Identity=31.3829787234043, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082160, Length=186, Percent_Identity=31.1827956989247, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1787335, Length=184, Percent_Identity=30.9782608695652, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1790717, Length=136, Percent_Identity=32.3529411764706, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1789208, Length=111, Percent_Identity=36.9369369369369, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI1788459, Length=133, Percent_Identity=38.3458646616541, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI2367365, Length=180, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1787905, Length=200, Percent_Identity=32, Blast_Score=65, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=196, Percent_Identity=32.1428571428571, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=199, Percent_Identity=32.1608040201005, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=194, Percent_Identity=32.4742268041237, Blast_Score=83, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=192, Percent_Identity=32.8125, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=196, Percent_Identity=31.6326530612245, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=213, Percent_Identity=29.5774647887324, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=143, Percent_Identity=34.2657342657343, Blast_Score=74, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115534694, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=186, Percent_Identity=30.6451612903226, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=186, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24639444, Length=199, Percent_Identity=32.1608040201005, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI23397609, Length=183, Percent_Identity=32.2404371584699, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355319, Length=190, Percent_Identity=31.0526315789474, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644337, Length=116, Percent_Identity=41.3793103448276, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571526, Length=188, Percent_Identity=30.8510638297872, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357041, Length=121, Percent_Identity=39.6694214876033, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24644339, Length=185, Percent_Identity=31.3513513513514, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24643142, Length=201, Percent_Identity=31.3432835820896, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 17839; Mature: 17707

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRLQNRTALVTGSTSNIDRAIAVAFAAEGAHVVVSGREEATRRLGGRLDILVNNAGIF
CCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHCCEEEEEECCCCCC
PPNTTLTTDDRTFDQVYAVNVKAPFFLTQAVAPAMVAAGEGVIINLGSWVARLGLPVGSL
CCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCHHHH
YSSTKGALETLTRAWAAEFGPLGVRVNAVSPGVIRTLTWTPPSSIRPRP
HHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
AQRLQNRTALVTGSTSNIDRAIAVAFAAEGAHVVVSGREEATRRLGGRLDILVNNAGIF
CCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHCCEEEEEECCCCCC
PPNTTLTTDDRTFDQVYAVNVKAPFFLTQAVAPAMVAAGEGVIINLGSWVARLGLPVGSL
CCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCHHHH
YSSTKGALETLTRAWAAEFGPLGVRVNAVSPGVIRTLTWTPPSSIRPRP
HHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]