| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is iolI [H]
Identifier: 158318538
GI number: 158318538
Start: 8297575
End: 8298426
Strand: Direct
Name: iolI [H]
Synonym: Franean1_6806
Alternate gene names: 158318538
Gene position: 8297575-8298426 (Clockwise)
Preceding gene: 158318536
Following gene: 158318539
Centisome position: 92.38
GC content: 68.19
Gene sequence:
>852_bases ATGAGGGCCATTTCGGCTCCGACTCTTCTACCGCTCGGCCATCCGGTCGACGCTGCCGACGTCCGGACACTCGTCGACGC CGTCGCGGACGCGGGGTTCGACGGGGCGCAGATGACGAGTTCGCACCTCGCTGGCGCCGTCGCTGACGGTATGACTCCGG AGGAGTTCTTCGGTTACCACCGGGACAGGGGGCTGGCGATCCCCACTGTCGAGGTTCTGATGGAATGGGTCACCGCCGAC CGACAGGAGATAGCCGAGCAGGCCCGACCACTTCTCGACATCGCGCAGTGGGCCGGCTCCCCGACGGTTATCGCGACGAC GCTGGAGGCCGAGGTACCGTCGATCGCCGGCGTGGCGGAGCGGCTGGCGTACCTGTGCGATCTCGCGGCGGAGCGGGGTC TGCGGATCAGTTTCGAGTTCCTGCCGTGGTCGGTGGTGCCGAACATCAGGGCGGCGATGCGGCTCCTGGATGCGGTGGAC CGCGACAACCTCGGCCTGGTAGTCGACATGTGGCATTGGTTCCGCCAGCCTGGTGGGCCCGATTACGACACCCTGCGTGA CGTGCCGACGGAGCGGATCCATGTCCTTCAGCTGTGTGACGCGCCTACGCGGCCGGCCGACGACCTGAGGACGGAGACGA TCATCGCCCGCCTGCTACCCGGGGACGGCGACGCCGACATCGAGGCTGTCCTGGATGTTCTCGTCGCGACCGGAGCCGAT CCCCTCGTGGCGACGGAGGTGTACTCCGCCTCGCTCGCGGGCCTGGGGCCAGCCGAGATGGCACGGCGCGCGTTCGCCGC CACGGAGACAGTTCTCGGCGGACGTTTTCCGTCCCACGGCACGAGTGGTTGA
Upstream 100 bases:
>100_bases CAACAACACAACATCGCCACAACTCACACATGACGTAGGTGTCAGAGATCTAGCCTGGGCTCGCGCGCCGCAGCATTCTT CCCGATGAGAGGTTCGTCCG
Downstream 100 bases:
>100_bases AGGCGCGGCGCACGCGGCGCACGCGGCGCACGGCGCGCGCAGGTTGGGATCGTCGATCGTTGATCGGGTGACAGCGCGGT CGGGTTGCCGGCCGTGCTCA
Product: xylose isomerase domain-containing protein
Products: NA
Alternate protein names: 2-keto-myo-inositol isomerase; 2KMI isomerase [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MRAISAPTLLPLGHPVDAADVRTLVDAVADAGFDGAQMTSSHLAGAVADGMTPEEFFGYHRDRGLAIPTVEVLMEWVTAD RQEIAEQARPLLDIAQWAGSPTVIATTLEAEVPSIAGVAERLAYLCDLAAERGLRISFEFLPWSVVPNIRAAMRLLDAVD RDNLGLVVDMWHWFRQPGGPDYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIEAVLDVLVATGAD PLVATEVYSASLAGLGPAEMARRAFAATETVLGGRFPSHGTSG
Sequences:
>Translated_283_residues MRAISAPTLLPLGHPVDAADVRTLVDAVADAGFDGAQMTSSHLAGAVADGMTPEEFFGYHRDRGLAIPTVEVLMEWVTAD RQEIAEQARPLLDIAQWAGSPTVIATTLEAEVPSIAGVAERLAYLCDLAAERGLRISFEFLPWSVVPNIRAAMRLLDAVD RDNLGLVVDMWHWFRQPGGPDYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIEAVLDVLVATGAD PLVATEVYSASLAGLGPAEMARRAFAATETVLGGRFPSHGTSG >Mature_283_residues MRAISAPTLLPLGHPVDAADVRTLVDAVADAGFDGAQMTSSHLAGAVADGMTPEEFFGYHRDRGLAIPTVEVLMEWVTAD RQEIAEQARPLLDIAQWAGSPTVIATTLEAEVPSIAGVAERLAYLCDLAAERGLRISFEFLPWSVVPNIRAAMRLLDAVD RDNLGLVVDMWHWFRQPGGPDYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIEAVLDVLVATGAD PLVATEVYSASLAGLGPAEMARRAFAATETVLGGRFPSHGTSG
Specific function: Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6/3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5/4,6- pentahydroxycyclohexanone) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 30286; Mature: 30286
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAISAPTLLPLGHPVDAADVRTLVDAVADAGFDGAQMTSSHLAGAVADGMTPEEFFGYH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCHH RDRGLAIPTVEVLMEWVTADRQEIAEQARPLLDIAQWAGSPTVIATTLEAEVPSIAGVAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHH RLAYLCDLAAERGLRISFEFLPWSVVPNIRAAMRLLDAVDRDNLGLVVDMWHWFRQPGGP HHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCC DYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIEAVLDVLVATGAD CHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PLVATEVYSASLAGLGPAEMARRAFAATETVLGGRFPSHGTSG CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRAISAPTLLPLGHPVDAADVRTLVDAVADAGFDGAQMTSSHLAGAVADGMTPEEFFGYH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCHH RDRGLAIPTVEVLMEWVTADRQEIAEQARPLLDIAQWAGSPTVIATTLEAEVPSIAGVAE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHH RLAYLCDLAAERGLRISFEFLPWSVVPNIRAAMRLLDAVDRDNLGLVVDMWHWFRQPGGP HHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCC DYDTLRDVPTERIHVLQLCDAPTRPADDLRTETIIARLLPGDGDADIEAVLDVLVATGAD CHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PLVATEVYSASLAGLGPAEMARRAFAATETVLGGRFPSHGTSG CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA