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The map label for this gene is rcnA [H]

Identifier: 158318534

GI number: 158318534

Start: 8293214

End: 8294845

Strand: Direct

Name: rcnA [H]

Synonym: Franean1_6802

Alternate gene names: 158318534

Gene position: 8293214-8294845 (Clockwise)

Preceding gene: 158318533

Following gene: 158318535

Centisome position: 92.33

GC content: 71.94

Gene sequence:

>1632_bases
GTGACCTCGCTGCGTCGGGCAGCCGTCCTGGCCGTGACGGTGGCCGCGTTCGTCCTGGCGGCGGGCGGATCCGCATCGGC
ACATCCCCTCGGGAGTTTCACCGTCAACAGCGCGAGCGTGCTGAGGGTGGGCATCGAAGAGGTTCTCGTCGACGTGGTCG
CCGACTTCGCCGAGATACCGGCGGCGCAGGTCCGGCCGGACGTCGACGCGCTGGGAGCCGCCCGCTGGCGGGAAGCGGAG
TGCGCCCGCACGGCCGGACGGGCGACGCTGGCGATCGACGGCCGGGCCCGCCCGCTCGTCCCGATCGGCGGCTCGCTGTC
GTTCCCACCGGGCGACGGCGGGCTGTCGACGATGCGGCTGGTCTGCCGATACTCCGCCGAGACCGCCGGGGCAGCGGACA
CGGACCCTGACACGACAATTCGGTACACGCTGGCCGCGTACGCCGACCGGGTCGGCTGGCGGGAGACGGTCGCGGTCGGG
GACCGCACCACGGTGGTCTCCTCGGACGTACCGTCCCGCTCACCGACGAACCTGTTGACCCGGTACCCCGACGACCCGCT
GGGCGGCGGTTCCGACGTCACGCGCGCGACGCTGACCGTTCGTCCGGGCGGACCGGCCGCGGCCGACCCGTTGTCGCAGG
CGGGCGCCATCGGCGCTGGAACGCCTGGTAGCGGTGCGTCAGACGAGGCCCGGCAGGCGGCCGGCGGCCTCGCCGGTTGG
GTGAACGGCCTGGTCGAGCGGGACTCCTTCTCACTCGGCCTGGGCGTGCTCGCACTGCTCGCCGCGGTCGTGTTGGGGAC
AGCGCACGCGTTCGCCCCCGGGCACGGCAAGACGGTGATGGCGGCCCGGGTCGTCGGCGGCTCGGCGACAGGACGGCAAC
TCGCCGCCACCGCCGGAGCGGTCACGCTCACCCACACCCTCGGCGTTCTCGTCCTCGCGGTCGTGCTGTCGGCGTCGAGC
GGCTTCGCTCCGGAGAAGATCTATCCGTGGCTCGGTGTCGCGAGCGGGTTGCTGATGATCTGTCTCGGCGCCAGTCTGCT
GCGGTCAAGACTGATCATGTCGCCGTATCGCCACCTGTTGTCCACAGGCGACGGCCACTCGAATCACCACCGCCATGAAC
ACGACCGTGGACACAGCCACGCCCGTCCTCAACGCGACGACAGCCATCACCGCCACCATGGCAGCGGCATTCACAGCCAT
GGGCACCACGACCACGACCCTTCGCGCGATCATGGTCATGCGCACCAGCACGGTCACTCGCATGGCGGGCGCTGGCACGT
GCACCCGCCCGTCACCGACCAACCGAGGCTACGCAGCCTGCTCGCCGCGGGACTCGTCGGCGGCATGGTGCCGACGCCGT
CGGCCGTCGTCGTGCTGCTTGGAGCGGTCGCACTGGGGCGGGCATGGTTCGGGGTCCTGCTGGTTCTCGCCTACGGCGTG
GGAATGGCGGCGACGCTGGTCGGCGTCGGGTTCCTGCTCGACCGCACACTCATCCCGCTGCTCCAGCGCACCCAGACGCT
GGTGCCGGGGTTCGCCGCCGGCCTGCGTTGGACGCCGGTGGCGACAGCCGCCCTGGTCGTGCTCGTCGGCGCCGTCGTGG
CGCTGCGTGCCGGCAGCCAGGTCACGATATGA

Upstream 100 bases:

>100_bases
TCGCGGACCTCCGGGCGGCGCTGGACACCGACCCGCACTTCTCACCGTTGCACGCGCCCCGGGCACAGGCCCTTCTCGCG
TCCCTCGACGCGAGTGCCCG

Downstream 100 bases:

>100_bases
CTACAGGCGGATCACAGGGTGACAGAGTCTACGGCTTGCGTCCGATACCGCCCGCCACCAGCCTGACAGCCAGTGGGTAC
GGCTCGACGAGGTTCAGTCC

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MTSLRRAAVLAVTVAAFVLAAGGSASAHPLGSFTVNSASVLRVGIEEVLVDVVADFAEIPAAQVRPDVDALGAARWREAE
CARTAGRATLAIDGRARPLVPIGGSLSFPPGDGGLSTMRLVCRYSAETAGAADTDPDTTIRYTLAAYADRVGWRETVAVG
DRTTVVSSDVPSRSPTNLLTRYPDDPLGGGSDVTRATLTVRPGGPAAADPLSQAGAIGAGTPGSGASDEARQAAGGLAGW
VNGLVERDSFSLGLGVLALLAAVVLGTAHAFAPGHGKTVMAARVVGGSATGRQLAATAGAVTLTHTLGVLVLAVVLSASS
GFAPEKIYPWLGVASGLLMICLGASLLRSRLIMSPYRHLLSTGDGHSNHHRHEHDRGHSHARPQRDDSHHRHHGSGIHSH
GHHDHDPSRDHGHAHQHGHSHGGRWHVHPPVTDQPRLRSLLAAGLVGGMVPTPSAVVVLLGAVALGRAWFGVLLVLAYGV
GMAATLVGVGFLLDRTLIPLLQRTQTLVPGFAAGLRWTPVATAALVVLVGAVVALRAGSQVTI

Sequences:

>Translated_543_residues
MTSLRRAAVLAVTVAAFVLAAGGSASAHPLGSFTVNSASVLRVGIEEVLVDVVADFAEIPAAQVRPDVDALGAARWREAE
CARTAGRATLAIDGRARPLVPIGGSLSFPPGDGGLSTMRLVCRYSAETAGAADTDPDTTIRYTLAAYADRVGWRETVAVG
DRTTVVSSDVPSRSPTNLLTRYPDDPLGGGSDVTRATLTVRPGGPAAADPLSQAGAIGAGTPGSGASDEARQAAGGLAGW
VNGLVERDSFSLGLGVLALLAAVVLGTAHAFAPGHGKTVMAARVVGGSATGRQLAATAGAVTLTHTLGVLVLAVVLSASS
GFAPEKIYPWLGVASGLLMICLGASLLRSRLIMSPYRHLLSTGDGHSNHHRHEHDRGHSHARPQRDDSHHRHHGSGIHSH
GHHDHDPSRDHGHAHQHGHSHGGRWHVHPPVTDQPRLRSLLAAGLVGGMVPTPSAVVVLLGAVALGRAWFGVLLVLAYGV
GMAATLVGVGFLLDRTLIPLLQRTQTLVPGFAAGLRWTPVATAALVVLVGAVVALRAGSQVTI
>Mature_542_residues
TSLRRAAVLAVTVAAFVLAAGGSASAHPLGSFTVNSASVLRVGIEEVLVDVVADFAEIPAAQVRPDVDALGAARWREAEC
ARTAGRATLAIDGRARPLVPIGGSLSFPPGDGGLSTMRLVCRYSAETAGAADTDPDTTIRYTLAAYADRVGWRETVAVGD
RTTVVSSDVPSRSPTNLLTRYPDDPLGGGSDVTRATLTVRPGGPAAADPLSQAGAIGAGTPGSGASDEARQAAGGLAGWV
NGLVERDSFSLGLGVLALLAAVVLGTAHAFAPGHGKTVMAARVVGGSATGRQLAATAGAVTLTHTLGVLVLAVVLSASSG
FAPEKIYPWLGVASGLLMICLGASLLRSRLIMSPYRHLLSTGDGHSNHHRHEHDRGHSHARPQRDDSHHRHHGSGIHSHG
HHDHDPSRDHGHAHQHGHSHGGRWHVHPPVTDQPRLRSLLAAGLVGGMVPTPSAVVVLLGAVALGRAWFGVLLVLAYGVG
MAATLVGVGFLLDRTLIPLLQRTQTLVPGFAAGLRWTPVATAALVVLVGAVVALRAGSQVTI

Specific function: Efflux system for nickel and cobalt [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=231, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 55749; Mature: 55618

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLRRAAVLAVTVAAFVLAAGGSASAHPLGSFTVNSASVLRVGIEEVLVDVVADFAEIP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
AAQVRPDVDALGAARWREAECARTAGRATLAIDGRARPLVPIGGSLSFPPGDGGLSTMRL
HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHH
VCRYSAETAGAADTDPDTTIRYTLAAYADRVGWRETVAVGDRTTVVSSDVPSRSPTNLLT
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHEECCCCCEEEECCCCCCCCCHHHH
RYPDDPLGGGSDVTRATLTVRPGGPAAADPLSQAGAIGAGTPGSGASDEARQAAGGLAGW
CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHH
VNGLVERDSFSLGLGVLALLAAVVLGTAHAFAPGHGKTVMAARVVGGSATGRQLAATAGA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHCH
VTLTHTLGVLVLAVVLSASSGFAPEKIYPWLGVASGLLMICLGASLLRSRLIMSPYRHLL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STGDGHSNHHRHEHDRGHSHARPQRDDSHHRHHGSGIHSHGHHDHDPSRDHGHAHQHGHS
HCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCC
HGGRWHVHPPVTDQPRLRSLLAAGLVGGMVPTPSAVVVLLGAVALGRAWFGVLLVLAYGV
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMAATLVGVGFLLDRTLIPLLQRTQTLVPGFAAGLRWTPVATAALVVLVGAVVALRAGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
VTI
CCC
>Mature Secondary Structure 
TSLRRAAVLAVTVAAFVLAAGGSASAHPLGSFTVNSASVLRVGIEEVLVDVVADFAEIP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
AAQVRPDVDALGAARWREAECARTAGRATLAIDGRARPLVPIGGSLSFPPGDGGLSTMRL
HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHH
VCRYSAETAGAADTDPDTTIRYTLAAYADRVGWRETVAVGDRTTVVSSDVPSRSPTNLLT
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHEECCCCCEEEECCCCCCCCCHHHH
RYPDDPLGGGSDVTRATLTVRPGGPAAADPLSQAGAIGAGTPGSGASDEARQAAGGLAGW
CCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHH
VNGLVERDSFSLGLGVLALLAAVVLGTAHAFAPGHGKTVMAARVVGGSATGRQLAATAGA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHCH
VTLTHTLGVLVLAVVLSASSGFAPEKIYPWLGVASGLLMICLGASLLRSRLIMSPYRHLL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STGDGHSNHHRHEHDRGHSHARPQRDDSHHRHHGSGIHSHGHHDHDPSRDHGHAHQHGHS
HCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCC
HGGRWHVHPPVTDQPRLRSLLAAGLVGGMVPTPSAVVVLLGAVALGRAWFGVLLVLAYGV
CCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMAATLVGVGFLLDRTLIPLLQRTQTLVPGFAAGLRWTPVATAALVVLVGAVVALRAGSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
VTI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA