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The map label for this gene is 158318512

Identifier: 158318512

GI number: 158318512

Start: 8252167

End: 8253384

Strand: Reverse

Name: 158318512

Synonym: Franean1_6780

Alternate gene names: NA

Gene position: 8253384-8252167 (Counterclockwise)

Preceding gene: 158318513

Following gene: 158318509

Centisome position: 91.89

GC content: 66.91

Gene sequence:

>1218_bases
ATGGACACGGGGGCCCCAGCGGAGGGCCGTGCGATGGCGATGTCGGATGACGTGAACTTCTTCGTGTCGTACACGGGGGT
GGATGAGGCATGGGCGGAGTGGATCGCCTGGGTGTTGGAGGAGGCTGGGTATACGACGCGGTTGCAGGTGTGGGATTTCG
GTCCGGGGAGCCGGTTCGTTGATCAGATGCATCAGGCGGCGCAGCAGGCGCAGCGCACCGTCGCTGTGCTGTCGGATGCG
TATCTGGGATCTCGGTTCGGGGCTGCAGAGTGGCAGGCGGCATGGGCAGATGATCCGGATGGCCGGATCGGGAAACTGCT
GGTCTTCCGGGTTGAGGACTGCCCCCAGCCCGGACTGTTGGGCCAGTTGGTGAGTGTGGATCTCTTCGGGGTTGGCCAGG
AGGCCGCGGCCGGACGGCTCCTGGCGGCAGCGAGAGGTGAGCGCGGCAAGCCGTCGACTCGGCCGGTCTTCCCGGGTGGT
CGTGCGGTCTCGGAGGGCTCTGTGGATAAGAGGGCGCCGGTATTTCCCGGGCAGCGGCCTCCCGGCGTGGAGCTGATCGT
GGTCGGCGACGCGGCCGGGGACCACCTGCGGAGTTTGCGGTCGTGGTTATTGGAGGAGCCAGAGCTTCGGGGCCGGGTGT
CGTTGAGGGAGGCACCGCCGGGGCCGGGAGAGATGGGGCCGCGGCCCGCCGCCGTGGTGGTGAGTCTGCGGGCGTCAGCC
CTCCGCTCGGTCCAAGCCTTGGATCTTGCGTTGGCGAGCTGGGGAAGGTCGCGTAGGTCAGGGCAGGAGATACAGGTCGA
ACTCCGGGCGGGGGATCTGCGTGTGAAGGTGTCGACGAGCTCCGAGGGGTTGAAGAACCCGGCGCTGCGGTCCTTCTTCG
AGGCCTTGGAGGCCCTGATGGTGGCAGGCTCCGCTCCCGATAGGGACGGGTCGAACGGTGCTGATACTGTTGGGGTGAGT
GAGGGATTGACACGGGTACAGGTGGAGGCGCTGGCAGAGGTGTACGGTTCGCCGCCCGCCGCAGGGGCGTTGATGCATCG
GGCCGGGCTACGACCGGAACTGTTTGCGGCTTTCGTGGAGGGAACGTTCGCGGTCAGTTTCTGGACCGAGGTGGGGCATC
AGTTGGAGTTGGGTCGCGCGCCGGGCGGAGCAGCCAGCCTTTTGACTGCCGCAGCGGAGGATTACCCCGGCCATCCGGTA
TTTAGTGGTAGGGGTTGA

Upstream 100 bases:

>100_bases
TCGGACGCGACCGGCCAGGCTAACCGGAGACGTCACGGCGGCTTGGTTCGCCGCGGTCGGTGAGGCGGTGACGCCGGATG
GCAGGCTATGAGGTATGAGC

Downstream 100 bases:

>100_bases
CCCGAGACTCCGCTGGCTCGCGGCGATATCGCGGTAAGACAGCTTTCCTGCTAGAGGGTGTTTGAAAAGTGTCAGGGTGA
TCTCCCGGTGAGGCGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: WD40 Repeat Subgroup; TPR Repeat-Containing Protein; WD-40 Repeat-Containing Protein; NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; Peptidase; Ll-Interleukin Receptor; Chaperone Protein DNAK; Transmembrane Receptor Activity; Pentapeptide Repeat Protein

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MDTGAPAEGRAMAMSDDVNFFVSYTGVDEAWAEWIAWVLEEAGYTTRLQVWDFGPGSRFVDQMHQAAQQAQRTVAVLSDA
YLGSRFGAAEWQAAWADDPDGRIGKLLVFRVEDCPQPGLLGQLVSVDLFGVGQEAAAGRLLAAARGERGKPSTRPVFPGG
RAVSEGSVDKRAPVFPGQRPPGVELIVVGDAAGDHLRSLRSWLLEEPELRGRVSLREAPPGPGEMGPRPAAVVVSLRASA
LRSVQALDLALASWGRSRRSGQEIQVELRAGDLRVKVSTSSEGLKNPALRSFFEALEALMVAGSAPDRDGSNGADTVGVS
EGLTRVQVEALAEVYGSPPAAGALMHRAGLRPELFAAFVEGTFAVSFWTEVGHQLELGRAPGGAASLLTAAAEDYPGHPV
FSGRG

Sequences:

>Translated_405_residues
MDTGAPAEGRAMAMSDDVNFFVSYTGVDEAWAEWIAWVLEEAGYTTRLQVWDFGPGSRFVDQMHQAAQQAQRTVAVLSDA
YLGSRFGAAEWQAAWADDPDGRIGKLLVFRVEDCPQPGLLGQLVSVDLFGVGQEAAAGRLLAAARGERGKPSTRPVFPGG
RAVSEGSVDKRAPVFPGQRPPGVELIVVGDAAGDHLRSLRSWLLEEPELRGRVSLREAPPGPGEMGPRPAAVVVSLRASA
LRSVQALDLALASWGRSRRSGQEIQVELRAGDLRVKVSTSSEGLKNPALRSFFEALEALMVAGSAPDRDGSNGADTVGVS
EGLTRVQVEALAEVYGSPPAAGALMHRAGLRPELFAAFVEGTFAVSFWTEVGHQLELGRAPGGAASLLTAAAEDYPGHPV
FSGRG
>Mature_405_residues
MDTGAPAEGRAMAMSDDVNFFVSYTGVDEAWAEWIAWVLEEAGYTTRLQVWDFGPGSRFVDQMHQAAQQAQRTVAVLSDA
YLGSRFGAAEWQAAWADDPDGRIGKLLVFRVEDCPQPGLLGQLVSVDLFGVGQEAAAGRLLAAARGERGKPSTRPVFPGG
RAVSEGSVDKRAPVFPGQRPPGVELIVVGDAAGDHLRSLRSWLLEEPELRGRVSLREAPPGPGEMGPRPAAVVVSLRASA
LRSVQALDLALASWGRSRRSGQEIQVELRAGDLRVKVSTSSEGLKNPALRSFFEALEALMVAGSAPDRDGSNGADTVGVS
EGLTRVQVEALAEVYGSPPAAGALMHRAGLRPELFAAFVEGTFAVSFWTEVGHQLELGRAPGGAASLLTAAAEDYPGHPV
FSGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42835; Mature: 42835

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGAPAEGRAMAMSDDVNFFVSYTGVDEAWAEWIAWVLEEAGYTTRLQVWDFGPGSRFV
CCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHH
DQMHQAAQQAQRTVAVLSDAYLGSRFGAAEWQAAWADDPDGRIGKLLVFRVEDCPQPGLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHH
GQLVSVDLFGVGQEAAAGRLLAAARGERGKPSTRPVFPGGRAVSEGSVDKRAPVFPGQRP
HHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGVELIVVGDAAGDHLRSLRSWLLEEPELRGRVSLREAPPGPGEMGPRPAAVVVSLRASA
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHEEEHHHHHH
LRSVQALDLALASWGRSRRSGQEIQVELRAGDLRVKVSTSSEGLKNPALRSFFEALEALM
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHH
VAGSAPDRDGSNGADTVGVSEGLTRVQVEALAEVYGSPPAAGALMHRAGLRPELFAAFVE
HCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
GTFAVSFWTEVGHQLELGRAPGGAASLLTAAAEDYPGHPVFSGRG
CHHEEEEHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDTGAPAEGRAMAMSDDVNFFVSYTGVDEAWAEWIAWVLEEAGYTTRLQVWDFGPGSRFV
CCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHH
DQMHQAAQQAQRTVAVLSDAYLGSRFGAAEWQAAWADDPDGRIGKLLVFRVEDCPQPGLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHH
GQLVSVDLFGVGQEAAAGRLLAAARGERGKPSTRPVFPGGRAVSEGSVDKRAPVFPGQRP
HHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGVELIVVGDAAGDHLRSLRSWLLEEPELRGRVSLREAPPGPGEMGPRPAAVVVSLRASA
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHEEEHHHHHH
LRSVQALDLALASWGRSRRSGQEIQVELRAGDLRVKVSTSSEGLKNPALRSFFEALEALM
HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHH
VAGSAPDRDGSNGADTVGVSEGLTRVQVEALAEVYGSPPAAGALMHRAGLRPELFAAFVE
HCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
GTFAVSFWTEVGHQLELGRAPGGAASLLTAAAEDYPGHPVFSGRG
CHHEEEEHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA