| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318510
Identifier: 158318510
GI number: 158318510
Start: 8250823
End: 8251158
Strand: Direct
Name: 158318510
Synonym: Franean1_6778
Alternate gene names: NA
Gene position: 8250823-8251158 (Clockwise)
Preceding gene: 158318508
Following gene: 158318511
Centisome position: 91.86
GC content: 60.71
Gene sequence:
>336_bases GTGCTTTCGCCCTTGTCGTCCACGACCCGTCACCCTCGTCCACGCCCCGGGCCCGCAGCCGCGCCACCAGCTCGACCAAC CGAAGCAGACCCTCCACACCGATGGTCGGCCCGCACCAGCTGCCCTGCCCACTTCTACCTGCACTGTGACAAGCAGATTG AAGGTGTCTGGTCGTATCTGAAACGCATTTTCCTGGTGCATCTGGCCGCTCGGGGTATCGACGATGTCTTTCGAGCTGTC AAGCACGGACTGAAACGTGTGCAGTACCGTCTCGATCTTCTTGTCGGGTTCTTTGTCGAGACCGGGCTCGCCTGGGAAGA GCTCGGATCAACATGA
Upstream 100 bases:
>100_bases CGGCCAGCATGCTCAGCACCCGCAGCGCCGCCTGCCGGTTCACCTCCGGTAGCAGCTCCCACCACATCGCCCCCAGCCGA TCCGCCCGGATCTGGGGCAC
Downstream 100 bases:
>100_bases CTTCTCACATTAATCATCAGTATAGGGTGTTTGAAAAGGGCTGTATCGGGTATGTGGGAAGGCTGCGTGAAGCCTCGTGT GGGGGAGGCTGGTGATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MLSPLSSTTRHPRPRPGPAAAPPARPTEADPPHRWSARTSCPAHFYLHCDKQIEGVWSYLKRIFLVHLAARGIDDVFRAV KHGLKRVQYRLDLLVGFFVETGLAWEELGST
Sequences:
>Translated_111_residues MLSPLSSTTRHPRPRPGPAAAPPARPTEADPPHRWSARTSCPAHFYLHCDKQIEGVWSYLKRIFLVHLAARGIDDVFRAV KHGLKRVQYRLDLLVGFFVETGLAWEELGST >Mature_111_residues MLSPLSSTTRHPRPRPGPAAAPPARPTEADPPHRWSARTSCPAHFYLHCDKQIEGVWSYLKRIFLVHLAARGIDDVFRAV KHGLKRVQYRLDLLVGFFVETGLAWEELGST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12528; Mature: 12528
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPLSSTTRHPRPRPGPAAAPPARPTEADPPHRWSARTSCPAHFYLHCDKQIEGVWSYL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH KRIFLVHLAARGIDDVFRAVKHGLKRVQYRLDLLVGFFVETGLAWEELGST HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC >Mature Secondary Structure MLSPLSSTTRHPRPRPGPAAAPPARPTEADPPHRWSARTSCPAHFYLHCDKQIEGVWSYL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH KRIFLVHLAARGIDDVFRAVKHGLKRVQYRLDLLVGFFVETGLAWEELGST HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA