| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318500
Identifier: 158318500
GI number: 158318500
Start: 8231917
End: 8232477
Strand: Reverse
Name: 158318500
Synonym: Franean1_6768
Alternate gene names: NA
Gene position: 8232477-8231917 (Counterclockwise)
Preceding gene: 158318503
Following gene: 158318498
Centisome position: 91.65
GC content: 67.56
Gene sequence:
>561_bases GTGCTGCGGGATGCTGATGTCCGAAGAGTCCTTCTGGGTGGTCTCGCTCCTCACCTCGACGCGGACACCCTCGTGGTCGA CGAGCTCGACTTGTGCGGACTGACCCGGGTAGATGTCGCGGTCATCAACGGCCATCTGTCTGGCTTCGAGATCAAGGGCT CCACGGACACACTGCGTCGGCTGCCCGGCCAGGTCGCCGTCTACTCTCGGGTGCTCGACTTCGCTGAGCTGGTCGTGGCC GAGAACCACTACGAGCGCGCCCTGGATCTCCTTCCGGCCTGGTGGGGCGTCCGCATAGCCTCCGGAATCGAGCAGGTGCG TCTCGACAGCGCGCGCCCACCTCAACCGAACGACACGGTCGATCCGGGAGCGCTCGTACAGCTGCTGTGGCGGGACGAGG CTCTCGCCGAGCTCGCGGTGCGCGGCCTGGATCGCGGGGTCCGGTCCAAGCCCCGGTGGATCATCTGGGAGCGTCTCGCC GCCGAGGTCCCTCTCGAGGAGCTGAAGACCGCGGTGCGCACCCGACTCAAGGGCCGAACAGGCTGGCGAGCTGCTCGCTG A
Upstream 100 bases:
>100_bases GCCAACGCGCGGACGCATGACGGTCCGTTGTTGGAGAGATGTGCCAGCCGGTGCCAGAGTAGGTCGCCGTGGGTGAAGAT GTGATCACAGGGGTGGCGTG
Downstream 100 bases:
>100_bases CCGTCGTCAAATGGTGCAGGGTTCCGTACCGGCGCCAGGTCTTCCCGTTCCCGCCCTTCGCGCCCTTGGCTACCCCCTCG ATCCAGAGGTCGGCAGGACA
Product: putative phage-like protein
Products: NA
Alternate protein names: CII Phage-Related Protein; Phage Regulatory Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MLRDADVRRVLLGGLAPHLDADTLVVDELDLCGLTRVDVAVINGHLSGFEIKGSTDTLRRLPGQVAVYSRVLDFAELVVA ENHYERALDLLPAWWGVRIASGIEQVRLDSARPPQPNDTVDPGALVQLLWRDEALAELAVRGLDRGVRSKPRWIIWERLA AEVPLEELKTAVRTRLKGRTGWRAAR
Sequences:
>Translated_186_residues MLRDADVRRVLLGGLAPHLDADTLVVDELDLCGLTRVDVAVINGHLSGFEIKGSTDTLRRLPGQVAVYSRVLDFAELVVA ENHYERALDLLPAWWGVRIASGIEQVRLDSARPPQPNDTVDPGALVQLLWRDEALAELAVRGLDRGVRSKPRWIIWERLA AEVPLEELKTAVRTRLKGRTGWRAAR >Mature_186_residues MLRDADVRRVLLGGLAPHLDADTLVVDELDLCGLTRVDVAVINGHLSGFEIKGSTDTLRRLPGQVAVYSRVLDFAELVVA ENHYERALDLLPAWWGVRIASGIEQVRLDSARPPQPNDTVDPGALVQLLWRDEALAELAVRGLDRGVRSKPRWIIWERLA AEVPLEELKTAVRTRLKGRTGWRAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20737; Mature: 20737
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDADVRRVLLGGLAPHLDADTLVVDELDLCGLTRVDVAVINGHLSGFEIKGSTDTLRR CCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHEEECCCCCEEECCCHHHHHH LPGQVAVYSRVLDFAELVVAENHYERALDLLPAWWGVRIASGIEQVRLDSARPPQPNDTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DPGALVQLLWRDEALAELAVRGLDRGVRSKPRWIIWERLAAEVPLEELKTAVRTRLKGRT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC GWRAAR CCCCCC >Mature Secondary Structure MLRDADVRRVLLGGLAPHLDADTLVVDELDLCGLTRVDVAVINGHLSGFEIKGSTDTLRR CCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHEEECCCCCEEECCCHHHHHH LPGQVAVYSRVLDFAELVVAENHYERALDLLPAWWGVRIASGIEQVRLDSARPPQPNDTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DPGALVQLLWRDEALAELAVRGLDRGVRSKPRWIIWERLAAEVPLEELKTAVRTRLKGRT CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC GWRAAR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA