| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318496
Identifier: 158318496
GI number: 158318496
Start: 8228324
End: 8228611
Strand: Direct
Name: 158318496
Synonym: Franean1_6764
Alternate gene names: NA
Gene position: 8228324-8228611 (Clockwise)
Preceding gene: 158318492
Following gene: 158318499
Centisome position: 91.61
GC content: 75.35
Gene sequence:
>288_bases GTGCACCGCTGGCGGCCCGACGACACCAGCGGGCCGGATCGCCCGACCGACGCCGAGGTCAACGTGTACGGCGCGCTTGC CCGCGTCCCGGAACACCGCGGGATGGTGCCCGCGGCACGCCGCGGGCACCCGGCCGGTGGGACCTATGGCGACGCAGGTC CGACGGCCGTGACCAGCCGCGTCCGCCCCGGGACCTCGGCCGGCCACAGCTGGCAGACGGTCACCCTGCTCTCCGCCGCC CACTGCCGAGCCGTCGTCTCACGGGCATGCCGTTCGATCCGGAGATGA
Upstream 100 bases:
>100_bases GGTCTACCGGAGCCAGGGCATCCCCGCCACGGTCCGCAGCCGCAGTGAGGTCGCGCGGTTCTTCGACGGCCTCGACCTGG TCGAGCCCGGGGTGCAGCCC
Downstream 100 bases:
>100_bases TCCGTTCACGGAAGGTCAACACCACGGCCTTCCTGCGCGGCCTACGGTGGTCAGGCGCCGGGCCACCGCGGGGGCTCGGC CCGGCGTACCTCCCTCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MHRWRPDDTSGPDRPTDAEVNVYGALARVPEHRGMVPAARRGHPAGGTYGDAGPTAVTSRVRPGTSAGHSWQTVTLLSAA HCRAVVSRACRSIRR
Sequences:
>Translated_95_residues MHRWRPDDTSGPDRPTDAEVNVYGALARVPEHRGMVPAARRGHPAGGTYGDAGPTAVTSRVRPGTSAGHSWQTVTLLSAA HCRAVVSRACRSIRR >Mature_95_residues MHRWRPDDTSGPDRPTDAEVNVYGALARVPEHRGMVPAARRGHPAGGTYGDAGPTAVTSRVRPGTSAGHSWQTVTLLSAA HCRAVVSRACRSIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10168; Mature: 10168
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRWRPDDTSGPDRPTDAEVNVYGALARVPEHRGMVPAARRGHPAGGTYGDAGPTAVTSR CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC VRPGTSAGHSWQTVTLLSAAHCRAVVSRACRSIRR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHRWRPDDTSGPDRPTDAEVNVYGALARVPEHRGMVPAARRGHPAGGTYGDAGPTAVTSR CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC VRPGTSAGHSWQTVTLLSAAHCRAVVSRACRSIRR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA