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The map label for this gene is smf [H]

Identifier: 158318474

GI number: 158318474

Start: 8200811

End: 8201719

Strand: Reverse

Name: smf [H]

Synonym: Franean1_6742

Alternate gene names: 158318474

Gene position: 8201719-8200811 (Counterclockwise)

Preceding gene: 158318475

Following gene: 158318473

Centisome position: 91.31

GC content: 75.47

Gene sequence:

>909_bases
GTGCTCACCCAGCGCCTCCTCTGCCACCCGTTGGCCGCGAGACCGGCCCGGGAAACCCGAAAGGCCATCGTGATGACCAG
CGACGACGAGCGGCACGCCCGCGCCGCCCTGACCGCCCTCCCCGCCCGCATTTGGCCCTCGGCCACCGACAGCCGGACTG
ATCCGGTCGAGGTCTGGAAGGGCCTCGCTCCCGAGCACCCCGGGGTCGACCCCGCCCGACTGCTCGCGACCGCCACCGAC
GCCGGCTGGCGTTTCGTGATCCCCAGCGACCCCGGCTGGCCTGCCACCCTGACCCCCGGCACCGGTCCGCTTCCGGTCGG
CCTCTGGGCACGCGGCACCGGAGACCTGACCGGCCTCACCCGCCGGTCGGTCACCATCACCGGCGCCCGGCTCTGCAGCG
AGTACGGGCAGGCGGTCACCGCCGGCCTCGCCTATGACCTGACCACCCCGCTGGCCGCCCAGCCGGTCACCATCACCGCC
GCCGGCATCGGCGAGGGGATCGATGCCGCCGCCCTGCGGATCGCCGCCACACACCGGCGGGCCGTCGCGGTCCTGACCGC
CACCACGGGCATCACCCGCTACAACCGCACCCTCCTCACCGACGTCGCTGACGGCGGGCTGGTGCTCTGCCTGGCCGCGC
CCGGCCTCCCGCCGCGCTCGGGTCACCTCCTCGCCCGCGTGCGCCTACTCGCCACCCTCACCCGGGCCACCGTCCTCGTG
GAGTCGACCACCCGCGGGTACGCGTTCGCGACCGCGCAGGCCGCCCGGCTGCGACGCCGCCCCGTCATGGCCGTCCCCGG
ACCGATCGGCTCCACGCTCAGCGCCGGCCCGAACGCCCTGCTCACTGAGGGCACCGCCCGCCTGGTCACCAGCGCCGAGG
ACATCCGCGCCGTCCTCGACCAGACCTGA

Upstream 100 bases:

>100_bases
GAGCGCTCCCGCTGGCGCACGCCCCGCCCACCCGCCTAACCCGCGCGGCCCTCCACCAGCCGCACCCACCGCCCACCGCC
GGCCGTGCTCACCGCCGGCC

Downstream 100 bases:

>100_bases
CACCCCACCCCCAGGCACGGCCGGGGACACGCACTCACCCCCGGCCTCGCTCCACGCATGCCACGCCCCCTACCAGGCAC
GCCCGACGACTCGAACCTGA

Product: SMF family protein

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLTQRLLCHPLAARPARETRKAIVMTSDDERHARAALTALPARIWPSATDSRTDPVEVWKGLAPEHPGVDPARLLATATD
AGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLTRRSVTITGARLCSEYGQAVTAGLAYDLTTPLAAQPVTITA
AGIGEGIDAAALRIAATHRRAVAVLTATTGITRYNRTLLTDVADGGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLV
ESTTRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLDQT

Sequences:

>Translated_302_residues
MLTQRLLCHPLAARPARETRKAIVMTSDDERHARAALTALPARIWPSATDSRTDPVEVWKGLAPEHPGVDPARLLATATD
AGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLTRRSVTITGARLCSEYGQAVTAGLAYDLTTPLAAQPVTITA
AGIGEGIDAAALRIAATHRRAVAVLTATTGITRYNRTLLTDVADGGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLV
ESTTRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLDQT
>Mature_302_residues
MLTQRLLCHPLAARPARETRKAIVMTSDDERHARAALTALPARIWPSATDSRTDPVEVWKGLAPEHPGVDPARLLATATD
AGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLTRRSVTITGARLCSEYGQAVTAGLAYDLTTPLAAQPVTITA
AGIGEGIDAAALRIAATHRRAVAVLTATTGITRYNRTLLTDVADGGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLV
ESTTRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLDQT

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=187, Percent_Identity=31.5508021390374, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 31569; Mature: 31569

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQRLLCHPLAARPARETRKAIVMTSDDERHARAALTALPARIWPSATDSRTDPVEVWK
CCCHHHHHCCHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
GLAPEHPGVDPARLLATATDAGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLT
CCCCCCCCCCHHHHEEEECCCCEEEEECCCCCCCEEECCCCCCCCCCEEECCCCCCCCCC
RRSVTITGARLCSEYGQAVTAGLAYDLTTPLAAQPVTITAAGIGEGIDAAALRIAATHRR
CCEEEEHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCE
AVAVLTATTGITRYNRTLLTDVADGGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLV
EEEEEEEECCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEE
ESTTRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLD
ECCCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHC
QT
CC
>Mature Secondary Structure
MLTQRLLCHPLAARPARETRKAIVMTSDDERHARAALTALPARIWPSATDSRTDPVEVWK
CCCHHHHHCCHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
GLAPEHPGVDPARLLATATDAGWRFVIPSDPGWPATLTPGTGPLPVGLWARGTGDLTGLT
CCCCCCCCCCHHHHEEEECCCCEEEEECCCCCCCEEECCCCCCCCCCEEECCCCCCCCCC
RRSVTITGARLCSEYGQAVTAGLAYDLTTPLAAQPVTITAAGIGEGIDAAALRIAATHRR
CCEEEEHHHHHHHHHHHHHHHCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCE
AVAVLTATTGITRYNRTLLTDVADGGLVLCLAAPGLPPRSGHLLARVRLLATLTRATVLV
EEEEEEEECCCHHHCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEE
ESTTRGYAFATAQAARLRRRPVMAVPGPIGSTLSAGPNALLTEGTARLVTSAEDIRAVLD
ECCCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHC
QT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]