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The map label for this gene is ydcC [C]

Identifier: 158318441

GI number: 158318441

Start: 8149861

End: 8150919

Strand: Direct

Name: ydcC [C]

Synonym: Franean1_6709

Alternate gene names: 158318441

Gene position: 8149861-8150919 (Clockwise)

Preceding gene: 158318440

Following gene: 158318442

Centisome position: 90.74

GC content: 73.56

Gene sequence:

>1059_bases
GTGCCTTCAGTGTCGCCTACCCGCGTTCCCGACGGTCGACGGGCCCTGCTCGCGGGCCGGGCCGTCGCGCGGGCCGGAGG
GCTGCTCGGCGCACTGGGCGCGGTGCCCGGCCGGCGGCGGGCGCGGGGGCGTCGCTACGGGCTGGCGTCGGTGCTGGGGC
TGTGGTTCGCCGGGGTTCTGGCAGGTCAGCAGACGTTCACCGCGGTCTGGGAGTGGGCGGTCGACCTGCCGGCGGAGTTG
CTGGCCGGGTTCGGGCTGACCCGGGGGATCCCGTCGGAGCGGACGACCCGACGCCTGGTCGAGGGCTGCGACCCGGTCGC
GCTGGACGAGGCGCTCTCGGGCTGGATCGCCCGTGCCGCCACGGTCGGGGACCCGGGGCCGCGGGGGCTGGCCTTCGACG
GGAAGACCCTCAAAGGCACCAGGTCGTTCACCGAGGCGGGCGCGATGAGCCAGGAGGCGGTCCTCGAGGCGGTCTGGCAC
GACACCGGGATCACCGCCGGCCACCAGCGGGTCGTCGGCGGCGACGAGATCGCCGCCCTCGAGGCACTGGCCGGCCGGCT
CGACCTGACCGACGTCCTGGTCACGACGGCCGAGAAGGGCCACGGCCGGGTCGAGGTCCGTTCGTTGAAGGCGCTGACCG
TCACCACCCCGAAACTCGTCGGCTTCTGGGGCACCAAGCAGGTCATCGAACTGCGCCGACGGACCCGACGCAAGAAGACC
GTCACCGCGGCGCCGACCGTCTCCGAGGAGGTGTTCTACCTGGTCACCAGCCTGCCCGCCGAACAGGCCCACCCCCGCGA
CCTCGCCGCCCGCGCCCGCGCCCGCGGCCACTGGACCGTCGAAGCCATCCACCACGTCCGCGACCGCGTCCTCGACGAGG
ACCGCCACACCGCCCGCACCGCCAACGCCCCACTCGCCTGGGCGATCGCCCGCGACACCGCCATCAGCGCGCTACGCCTC
ACAGGACACAGAAGCATCGCCAAAGCCCTGCGAACCACCGCCCGCCAGCCCGAACGCGTCCTCCAGACCATCGCCCTGAT
CAGCGAAAAGGGACTTTGA

Upstream 100 bases:

>100_bases
AGGGGCGGGCCGGGAACGGCCCTGGGAAATGGGCGGACGCGGCGCCCACGGGATGATCGAGGTTCCTACACCATGATCGT
CCGAGAGTGGGGCCGCGTCC

Downstream 100 bases:

>100_bases
CGGCGCCCTGGTCTTGAGGTACAGCACTCCGCCGCCCAGCGTCCTGGCAAAGGCGAGGAAGCCTTGGAGGTCCACCGTGT
CCGGCGAGATGTTCGCCTCC

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; C-Term Transposase For IS; Transposase For IS

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MPSVSPTRVPDGRRALLAGRAVARAGGLLGALGAVPGRRRARGRRYGLASVLGLWFAGVLAGQQTFTAVWEWAVDLPAEL
LAGFGLTRGIPSERTTRRLVEGCDPVALDEALSGWIARAATVGDPGPRGLAFDGKTLKGTRSFTEAGAMSQEAVLEAVWH
DTGITAGHQRVVGGDEIAALEALAGRLDLTDVLVTTAEKGHGRVEVRSLKALTVTTPKLVGFWGTKQVIELRRRTRRKKT
VTAAPTVSEEVFYLVTSLPAEQAHPRDLAARARARGHWTVEAIHHVRDRVLDEDRHTARTANAPLAWAIARDTAISALRL
TGHRSIAKALRTTARQPERVLQTIALISEKGL

Sequences:

>Translated_352_residues
MPSVSPTRVPDGRRALLAGRAVARAGGLLGALGAVPGRRRARGRRYGLASVLGLWFAGVLAGQQTFTAVWEWAVDLPAEL
LAGFGLTRGIPSERTTRRLVEGCDPVALDEALSGWIARAATVGDPGPRGLAFDGKTLKGTRSFTEAGAMSQEAVLEAVWH
DTGITAGHQRVVGGDEIAALEALAGRLDLTDVLVTTAEKGHGRVEVRSLKALTVTTPKLVGFWGTKQVIELRRRTRRKKT
VTAAPTVSEEVFYLVTSLPAEQAHPRDLAARARARGHWTVEAIHHVRDRVLDEDRHTARTANAPLAWAIARDTAISALRL
TGHRSIAKALRTTARQPERVLQTIALISEKGL
>Mature_351_residues
PSVSPTRVPDGRRALLAGRAVARAGGLLGALGAVPGRRRARGRRYGLASVLGLWFAGVLAGQQTFTAVWEWAVDLPAELL
AGFGLTRGIPSERTTRRLVEGCDPVALDEALSGWIARAATVGDPGPRGLAFDGKTLKGTRSFTEAGAMSQEAVLEAVWHD
TGITAGHQRVVGGDEIAALEALAGRLDLTDVLVTTAEKGHGRVEVRSLKALTVTTPKLVGFWGTKQVIELRRRTRRKKTV
TAAPTVSEEVFYLVTSLPAEQAHPRDLAARARARGHWTVEAIHHVRDRVLDEDRHTARTANAPLAWAIARDTAISALRLT
GHRSIAKALRTTARQPERVLQTIALISEKGL

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37818; Mature: 37687

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVSPTRVPDGRRALLAGRAVARAGGLLGALGAVPGRRRARGRRYGLASVLGLWFAGVL
CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHH
AGQQTFTAVWEWAVDLPAELLAGFGLTRGIPSERTTRRLVEGCDPVALDEALSGWIARAA
HCCHHHHHHHHHHHCCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TVGDPGPRGLAFDGKTLKGTRSFTEAGAMSQEAVLEAVWHDTGITAGHQRVVGGDEIAAL
CCCCCCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHH
EALAGRLDLTDVLVTTAEKGHGRVEVRSLKALTVTTPKLVGFWGTKQVIELRRRTRRKKT
HHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHE
VTAAPTVSEEVFYLVTSLPAEQAHPRDLAARARARGHWTVEAIHHVRDRVLDEDRHTART
EECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHC
ANAPLAWAIARDTAISALRLTGHRSIAKALRTTARQPERVLQTIALISEKGL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSVSPTRVPDGRRALLAGRAVARAGGLLGALGAVPGRRRARGRRYGLASVLGLWFAGVL
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHH
AGQQTFTAVWEWAVDLPAELLAGFGLTRGIPSERTTRRLVEGCDPVALDEALSGWIARAA
HCCHHHHHHHHHHHCCHHHHHHHCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TVGDPGPRGLAFDGKTLKGTRSFTEAGAMSQEAVLEAVWHDTGITAGHQRVVGGDEIAAL
CCCCCCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHH
EALAGRLDLTDVLVTTAEKGHGRVEVRSLKALTVTTPKLVGFWGTKQVIELRRRTRRKKT
HHHHCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHE
VTAAPTVSEEVFYLVTSLPAEQAHPRDLAARARARGHWTVEAIHHVRDRVLDEDRHTART
EECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHC
ANAPLAWAIARDTAISALRLTGHRSIAKALRTTARQPERVLQTIALISEKGL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA