| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318419
Identifier: 158318419
GI number: 158318419
Start: 8119737
End: 8120216
Strand: Direct
Name: 158318419
Synonym: Franean1_6684
Alternate gene names: NA
Gene position: 8119737-8120216 (Clockwise)
Preceding gene: 158318416
Following gene: 158318420
Centisome position: 90.4
GC content: 72.08
Gene sequence:
>480_bases ATGTACTACGAGACCTCGGTGACCATCGACGCCACGTCCGACGAGGTCTGGGCGGTGATACGGGACGTCGAACGCTGGCC CACCTGGACTCCGACGATGACCACCGTGGACATGGCGGCACGGCCCGCGGCGGTCGGGAGTTCGGGGGCCGACGGCGAAC TGCGCGACGGCAGCGTCGTGCGGATTCGGCAGCCCCGACTGCCCGCGGCCGAGTGGACCGTGACCGACCTGACCCCGGGC TCGGGCTTCTCCTGGATCTCCAGGGCCACCGGCATGACCACGGTCGCCGACCACCGCATCATGCCCGCCGCGGAAGACGG CAAGGTCACGGTGCGGCTGAGCCTGCGGCAGTCCGGGCCGCTGGCGCCGGTGGTGGCGCTTTTCATGGCGCGACTGGTCC GCCGCTACGTCGACACCGAGGCCCAGGGCCTGCGACAGCACTGCGAGCAGCGGTCCCGCGCCGGCCGGAGCGGCAGCTGA
Upstream 100 bases:
>100_bases TTGCGACGTCATGTACCAGATGGTACGTGTACCACTTGGTACACGTCGCGGCGCCACCCGGCGCCGGTCGAGAAACCGAT CACCCCACAGGAGGCACCCG
Downstream 100 bases:
>100_bases AACGCTGCACCTCACCTGCACGGCCACCGGAATTCAGCCGCCATCCGCGCGAGGCCGCCGGCCCGGGGTGCCTCGCAGCG CGCTTCGTGGACTGGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclase/Dehydrase
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MYYETSVTIDATSDEVWAVIRDVERWPTWTPTMTTVDMAARPAAVGSSGADGELRDGSVVRIRQPRLPAAEWTVTDLTPG SGFSWISRATGMTTVADHRIMPAAEDGKVTVRLSLRQSGPLAPVVALFMARLVRRYVDTEAQGLRQHCEQRSRAGRSGS
Sequences:
>Translated_159_residues MYYETSVTIDATSDEVWAVIRDVERWPTWTPTMTTVDMAARPAAVGSSGADGELRDGSVVRIRQPRLPAAEWTVTDLTPG SGFSWISRATGMTTVADHRIMPAAEDGKVTVRLSLRQSGPLAPVVALFMARLVRRYVDTEAQGLRQHCEQRSRAGRSGS >Mature_159_residues MYYETSVTIDATSDEVWAVIRDVERWPTWTPTMTTVDMAARPAAVGSSGADGELRDGSVVRIRQPRLPAAEWTVTDLTPG SGFSWISRATGMTTVADHRIMPAAEDGKVTVRLSLRQSGPLAPVVALFMARLVRRYVDTEAQGLRQHCEQRSRAGRSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17420; Mature: 17420
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYETSVTIDATSDEVWAVIRDVERWPTWTPTMTTVDMAARPAAVGSSGADGELRDGSVV CEEECEEEEECCCHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCEE RIRQPRLPAAEWTVTDLTPGSGFSWISRATGMTTVADHRIMPAAEDGKVTVRLSLRQSGP EEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC LAPVVALFMARLVRRYVDTEAQGLRQHCEQRSRAGRSGS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYYETSVTIDATSDEVWAVIRDVERWPTWTPTMTTVDMAARPAAVGSSGADGELRDGSVV CEEECEEEEECCCHHHHHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCEE RIRQPRLPAAEWTVTDLTPGSGFSWISRATGMTTVADHRIMPAAEDGKVTVRLSLRQSGP EEECCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC LAPVVALFMARLVRRYVDTEAQGLRQHCEQRSRAGRSGS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA