| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318414
Identifier: 158318414
GI number: 158318414
Start: 8115320
End: 8115850
Strand: Reverse
Name: 158318414
Synonym: Franean1_6679
Alternate gene names: NA
Gene position: 8115850-8115320 (Counterclockwise)
Preceding gene: 158318417
Following gene: 158318413
Centisome position: 90.36
GC content: 72.69
Gene sequence:
>531_bases GTGTATCCGATCACCCCGTGTCCCATCGTGGCTTCATTGAGAGACGGTAGTGAGGTGACCGATGACGACGACGACTGGGC GCCGCCGCCCGTGCCCGACGGCGGTGGCGACCCGGTGGCAGCCGTGGACGAGGCCCTCGCCGAGGCTGAGAACGCGCTGC GTGCCGGGGCGTGGCTGCCGGACGTGGACGAGATCGACGCCGTGGTGACCATCCTCCATCACACCGACCCGGCTCGGCGG CGCCCCGACACGCCGCTGCGCCGCGTCCTGCACCAGGCACTGGACGAGACCTATCCGCAGCTCACCGTCTGGCGGCCGCG CCCGCAGTACCTCTACGCCGTGGTGAAGACCCTGCACCTGCTCGCGTCGGACCCCGTCACCGGCGAGAACACCGCCGCCC TCCTCGTCGGATGGGACCGTCTCATCGACCTCCTGCGGGCCGTGCTCGAGGTGGCCAGGTTCGGGCCTCCGGAGCCGCCC GAGCCTGGTGCCGAGGCGCCGGACGTCCCCGGGCCCGGTGCCCGGCCGTAG
Upstream 100 bases:
>100_bases TGGGTTGTCACCGGAAGGTAGAGGCCTTCCGGCCGGACGGGGTCCCCCGCATCGTGCCTCTCGATGTCTTCCGCCGCGTC TCCCACCACGCGGCGGCGCT
Downstream 100 bases:
>100_bases CCACCCGGTGGCTCCTGCGTGGTACCCACACGGGTACTGACGGTCAGGCAGGGACCTCCCGCCGCGGGGAGCGGACCATC GGGTACGCGGCGGGAGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MYPITPCPIVASLRDGSEVTDDDDDWAPPPVPDGGGDPVAAVDEALAEAENALRAGAWLPDVDEIDAVVTILHHTDPARR RPDTPLRRVLHQALDETYPQLTVWRPRPQYLYAVVKTLHLLASDPVTGENTAALLVGWDRLIDLLRAVLEVARFGPPEPP EPGAEAPDVPGPGARP
Sequences:
>Translated_176_residues MYPITPCPIVASLRDGSEVTDDDDDWAPPPVPDGGGDPVAAVDEALAEAENALRAGAWLPDVDEIDAVVTILHHTDPARR RPDTPLRRVLHQALDETYPQLTVWRPRPQYLYAVVKTLHLLASDPVTGENTAALLVGWDRLIDLLRAVLEVARFGPPEPP EPGAEAPDVPGPGARP >Mature_176_residues MYPITPCPIVASLRDGSEVTDDDDDWAPPPVPDGGGDPVAAVDEALAEAENALRAGAWLPDVDEIDAVVTILHHTDPARR RPDTPLRRVLHQALDETYPQLTVWRPRPQYLYAVVKTLHLLASDPVTGENTAALLVGWDRLIDLLRAVLEVARFGPPEPP EPGAEAPDVPGPGARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19016; Mature: 19016
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPITPCPIVASLRDGSEVTDDDDDWAPPPVPDGGGDPVAAVDEALAEAENALRAGAWLP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DVDEIDAVVTILHHTDPARRRPDTPLRRVLHQALDETYPQLTVWRPRPQYLYAVVKTLHL CHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH LASDPVTGENTAALLVGWDRLIDLLRAVLEVARFGPPEPPEPGAEAPDVPGPGARP HHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYPITPCPIVASLRDGSEVTDDDDDWAPPPVPDGGGDPVAAVDEALAEAENALRAGAWLP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC DVDEIDAVVTILHHTDPARRRPDTPLRRVLHQALDETYPQLTVWRPRPQYLYAVVKTLHL CHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH LASDPVTGENTAALLVGWDRLIDLLRAVLEVARFGPPEPPEPGAEAPDVPGPGARP HHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA