| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318379
Identifier: 158318379
GI number: 158318379
Start: 8073032
End: 8073850
Strand: Reverse
Name: 158318379
Synonym: Franean1_6644
Alternate gene names: NA
Gene position: 8073850-8073032 (Counterclockwise)
Preceding gene: 158318381
Following gene: 158318376
Centisome position: 89.89
GC content: 71.79
Gene sequence:
>819_bases ATGGCGGACCGCTACGACGAGACGCGGGGCGGGGCGGAACGTGGCCGGACCGTCGCCGCCGCGCTCGCTCCGCACCTGCT CGGCGAGACGCCCCCGGAACGCGCGCGGCTGCTGGAGATCGGCGTCGGTACCGGTCTGGTCTCCGCCGCCTTCGTCGAAC TCGGCTGGTCCGTGGCCGGAGTGGATCTCTCCGAGCGGATGCTCGCCCGCGCCGCGGGACGGCTGCCCGGCCGGATCCTG CGCGCTGACGCGACAGCGATCCCACTCCGCTCAGGCACCGTGGACGCCTGTGCCGCGGTGCACGTGCTGCACCTCGTCGG CGATCAGCCCGCAGTGCTGGCCGAGGTCGTCCGGGTGCTGCGCCCGGGCGGCCGGTTCGGTTTCGTCGGGGCCGGGGCGC CCGACGGATCGGACATCTCCGAGATCATCCAAGCAATGCAGGCCACGCTTGCCGACGGCGCGTCCCGTCGCGACGCGCCC GACACCGTCACCCGGCTCGCCGAGCAGGCCGGCCTGCGCCTGGTCGCCGACCTCACCCTCACCGGCGCGGGACGTCCTTC GACCCCGCTGGAAGCCGCCCGGCAGATCGAGCTCCGGACATGGTCGACCTTCTGGGACGTCCCCGCGTCGAAATGGTCCA CGATCGTCGAACCCGCGCTGGACGCTCTTCGCGGTCTCCCGAACCCGATCGAGGCCCGGCCAGCCAGAATCCGTACGCCT TGCCTGATCTTCGAGAGCCAGTCTCCCGGGACGCCGGCTCGCGCAAGACAAGTCAATTACCCTGGGCGGCGTTTCATCAT TGATCGGCGGGTCGGGTAA
Upstream 100 bases:
>100_bases TCACCTCGGCGCGTCCGCGCTGGGCGGCGGCCAGCGACGGCGGGGTGTCGTGGTGCGGGATTAGCCTTGGACTGTGCCGG AGTCCGTGAACTTTGACCGT
Downstream 100 bases:
>100_bases AGGTCACGTGGGTGATGCCGCTGGGGGTCGTCGTGGATTCGACGGTGAAGCGCTTCTCCATCTCCTCGAGGCCCTCCCAC AGCCGCACCCCGCGGCCGAG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Maf Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MADRYDETRGGAERGRTVAAALAPHLLGETPPERARLLEIGVGTGLVSAAFVELGWSVAGVDLSERMLARAAGRLPGRIL RADATAIPLRSGTVDACAAVHVLHLVGDQPAVLAEVVRVLRPGGRFGFVGAGAPDGSDISEIIQAMQATLADGASRRDAP DTVTRLAEQAGLRLVADLTLTGAGRPSTPLEAARQIELRTWSTFWDVPASKWSTIVEPALDALRGLPNPIEARPARIRTP CLIFESQSPGTPARARQVNYPGRRFIIDRRVG
Sequences:
>Translated_272_residues MADRYDETRGGAERGRTVAAALAPHLLGETPPERARLLEIGVGTGLVSAAFVELGWSVAGVDLSERMLARAAGRLPGRIL RADATAIPLRSGTVDACAAVHVLHLVGDQPAVLAEVVRVLRPGGRFGFVGAGAPDGSDISEIIQAMQATLADGASRRDAP DTVTRLAEQAGLRLVADLTLTGAGRPSTPLEAARQIELRTWSTFWDVPASKWSTIVEPALDALRGLPNPIEARPARIRTP CLIFESQSPGTPARARQVNYPGRRFIIDRRVG >Mature_271_residues ADRYDETRGGAERGRTVAAALAPHLLGETPPERARLLEIGVGTGLVSAAFVELGWSVAGVDLSERMLARAAGRLPGRILR ADATAIPLRSGTVDACAAVHVLHLVGDQPAVLAEVVRVLRPGGRFGFVGAGAPDGSDISEIIQAMQATLADGASRRDAPD TVTRLAEQAGLRLVADLTLTGAGRPSTPLEAARQIELRTWSTFWDVPASKWSTIVEPALDALRGLPNPIEARPARIRTPC LIFESQSPGTPARARQVNYPGRRFIIDRRVG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28867; Mature: 28736
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRYDETRGGAERGRTVAAALAPHLLGETPPERARLLEIGVGTGLVSAAFVELGWSVAG CCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHEEEECCCHHHHHHHHHHHCCEEEC VDLSERMLARAAGRLPGRILRADATAIPLRSGTVDACAAVHVLHLVGDQPAVLAEVVRVL CCHHHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH RPGGRFGFVGAGAPDGSDISEIIQAMQATLADGASRRDAPDTVTRLAEQAGLRLVADLTL CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEE TGAGRPSTPLEAARQIELRTWSTFWDVPASKWSTIVEPALDALRGLPNPIEARPARIRTP ECCCCCCCHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC CLIFESQSPGTPARARQVNYPGRRFIIDRRVG EEEEECCCCCCCHHHHCCCCCCCEEEEECCCC >Mature Secondary Structure ADRYDETRGGAERGRTVAAALAPHLLGETPPERARLLEIGVGTGLVSAAFVELGWSVAG CCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHEEEECCCHHHHHHHHHHHCCEEEC VDLSERMLARAAGRLPGRILRADATAIPLRSGTVDACAAVHVLHLVGDQPAVLAEVVRVL CCHHHHHHHHHHCCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH RPGGRFGFVGAGAPDGSDISEIIQAMQATLADGASRRDAPDTVTRLAEQAGLRLVADLTL CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEE TGAGRPSTPLEAARQIELRTWSTFWDVPASKWSTIVEPALDALRGLPNPIEARPARIRTP ECCCCCCCHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC CLIFESQSPGTPARARQVNYPGRRFIIDRRVG EEEEECCCCCCCHHHHCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA