| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318365
Identifier: 158318365
GI number: 158318365
Start: 8061223
End: 8062611
Strand: Direct
Name: 158318365
Synonym: Franean1_6630
Alternate gene names: NA
Gene position: 8061223-8062611 (Clockwise)
Preceding gene: 158318363
Following gene: 158318366
Centisome position: 89.75
GC content: 72.07
Gene sequence:
>1389_bases GTGTGCGTGTCCCGGGAGGACCCCAAGGCGGTCTACCAGCGTCTGCGCACAGCGCACCTGAGTGCTGTGCGGGCCGCGCT CGAGGACCATGTGGCGCGGCTGGCGTGGCCACGCCAGCGCATCGAGCGCTACCGCACCGAACGGCTCCGGTCGTTGCTGG GGTTCGCGCGCGAGCGCTCGCCGTTCCACGCGGCCCGGATGCACGACATCGACCCGGCCACGGCGACGGTCGACGACCTC GCACGACTGCCAGCCATGGTCAAGCAGGATGTCCAGAACGAATGGGACAGGATCGTCACCACGCCCGACATCGACCGTGC GGGCGCCGAGCGGGTGCTGGCCCGGCAGGGCTGGTTCTCCTACACGCCCGCGGGACTCCAGGTCTTCAGCTCGGGCGGCT CCAGCGGTGTGCGCGGCGTCTACGTGTGGGACTGGGAGCAGTTCGTCACGCTCGCCTGTCTCGCCTGGCGGTGGCAGGCA CGTGCCGAGCGCGCCGCCGGCTCGGCCGGCCGCCCAGCGCGGCTGGCCGTGGTGGAGGCCGGCGAGCCGCCACATGCCAG CACGCCGTTGTTCGACGTCGCGACCGGGCCGTCGACGCGGACCGTCGTGATCCCGGCGGCGGCGCCCTTCGACCAGGTGC TGCACGCGGTGGCGGACGCGCGGCCGACCCATCTTGTGGGCTACGCCTCGGTCATCGGCCGCCTCGCCCGGGCCACGATC GCGGGAGAGCTCGATATCCGGCCGGTTCGGGTCAGCACCAACTCCGAGCCGCTCAGCCCACAGGACCGCCACGCGATCGG CGCCGCCTGGGGCGCCCCCGTCCACAACCTGTGGGGCTCGACCGAGATCGGCGTCCAGGCGGTCGGCTGCGGGCAAGACG ACGGCCTGCACATCTGCGAGGACGAGGTGATCCTCGAACGGGTCGACGCGGCCGGGCGCCCGGTCACTCCCGACGAACCC GCGGCGCGCACGCTCGCGACCGGGCTCGCGGGGCGCACGTTCCCGTTTGTTCGCTATGACCTCGGTGACGAGATCACGCT GCTGCCTGGCCGCTGCGCGTGTGGCAGCTCGATGCCGCGCGTCGCCGACATCGCCGGTCGGCGTGACGACGACTTCCGCT ACGGGCCGCGCGTCGTCCCGGCGAGCGCGTTCCGGTACGTGCTGGGTACCGACCCGCTGATCTCGGAATATCAGGTACGT CAGACCGCGGGCGGGGCGGAGGTGCTCGTGGTCGGGTCACCCGACGCCGCCACGGTAGCCGCGGCGCTGGGCTGCTCGCT GCGGCCGTATGGACTGACGGATCCCGACATCAGTGTGAGCATCGTCGAGCGGATCCCCCGGCACGTCTCGACAGGCAAGC TCAAGCGCTTTATCGCGCTGAGTGGCTAG
Upstream 100 bases:
>100_bases CAGATCACGCCGCGGCACGACCCGGCGAGGGGCGACGGGCGACGCCAGTGATCAAGCTCCGAGACCGCGGCTGGCGTGAC CGCTGCCCGCGACCGACACT
Downstream 100 bases:
>100_bases CCGCTTTACACCTCGGCGTTCCGCGAGGGGTCCGCTCCCCGCACCGTCCCACTCGTTCTTGTCGACGGCGCGGATCACCC AGTTGACCGGTCGGTGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Capsular Polysaccharide Biosynthesis Protein CapK; CapK Related-Protein; CapK Protein; Adenylate-Forming; AMP-Dependent Synthetase And Ligase; Phenylacetate-Co A Ligase; Capsular Polysaccharide Biosynthesis Protein; CoA Ligase; CapK Domain-Containing Protein; Polysaccharide Biosynthesis Protein; CoA Ligase Involved In Capsular Antigen Synthesis
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MCVSREDPKAVYQRLRTAHLSAVRAALEDHVARLAWPRQRIERYRTERLRSLLGFARERSPFHAARMHDIDPATATVDDL ARLPAMVKQDVQNEWDRIVTTPDIDRAGAERVLARQGWFSYTPAGLQVFSSGGSSGVRGVYVWDWEQFVTLACLAWRWQA RAERAAGSAGRPARLAVVEAGEPPHASTPLFDVATGPSTRTVVIPAAAPFDQVLHAVADARPTHLVGYASVIGRLARATI AGELDIRPVRVSTNSEPLSPQDRHAIGAAWGAPVHNLWGSTEIGVQAVGCGQDDGLHICEDEVILERVDAAGRPVTPDEP AARTLATGLAGRTFPFVRYDLGDEITLLPGRCACGSSMPRVADIAGRRDDDFRYGPRVVPASAFRYVLGTDPLISEYQVR QTAGGAEVLVVGSPDAATVAAALGCSLRPYGLTDPDISVSIVERIPRHVSTGKLKRFIALSG
Sequences:
>Translated_462_residues MCVSREDPKAVYQRLRTAHLSAVRAALEDHVARLAWPRQRIERYRTERLRSLLGFARERSPFHAARMHDIDPATATVDDL ARLPAMVKQDVQNEWDRIVTTPDIDRAGAERVLARQGWFSYTPAGLQVFSSGGSSGVRGVYVWDWEQFVTLACLAWRWQA RAERAAGSAGRPARLAVVEAGEPPHASTPLFDVATGPSTRTVVIPAAAPFDQVLHAVADARPTHLVGYASVIGRLARATI AGELDIRPVRVSTNSEPLSPQDRHAIGAAWGAPVHNLWGSTEIGVQAVGCGQDDGLHICEDEVILERVDAAGRPVTPDEP AARTLATGLAGRTFPFVRYDLGDEITLLPGRCACGSSMPRVADIAGRRDDDFRYGPRVVPASAFRYVLGTDPLISEYQVR QTAGGAEVLVVGSPDAATVAAALGCSLRPYGLTDPDISVSIVERIPRHVSTGKLKRFIALSG >Mature_462_residues MCVSREDPKAVYQRLRTAHLSAVRAALEDHVARLAWPRQRIERYRTERLRSLLGFARERSPFHAARMHDIDPATATVDDL ARLPAMVKQDVQNEWDRIVTTPDIDRAGAERVLARQGWFSYTPAGLQVFSSGGSSGVRGVYVWDWEQFVTLACLAWRWQA RAERAAGSAGRPARLAVVEAGEPPHASTPLFDVATGPSTRTVVIPAAAPFDQVLHAVADARPTHLVGYASVIGRLARATI AGELDIRPVRVSTNSEPLSPQDRHAIGAAWGAPVHNLWGSTEIGVQAVGCGQDDGLHICEDEVILERVDAAGRPVTPDEP AARTLATGLAGRTFPFVRYDLGDEITLLPGRCACGSSMPRVADIAGRRDDDFRYGPRVVPASAFRYVLGTDPLISEYQVR QTAGGAEVLVVGSPDAATVAAALGCSLRPYGLTDPDISVSIVERIPRHVSTGKLKRFIALSG
Specific function: Unknown
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49948; Mature: 49948
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVSREDPKAVYQRLRTAHLSAVRAALEDHVARLAWPRQRIERYRTERLRSLLGFARERS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC PFHAARMHDIDPATATVDDLARLPAMVKQDVQNEWDRIVTTPDIDRAGAERVLARQGWFS CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC YTPAGLQVFSSGGSSGVRGVYVWDWEQFVTLACLAWRWQARAERAAGSAGRPARLAVVEA CCCHHHHEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC GEPPHASTPLFDVATGPSTRTVVIPAAAPFDQVLHAVADARPTHLVGYASVIGRLARATI CCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AGELDIRPVRVSTNSEPLSPQDRHAIGAAWGAPVHNLWGSTEIGVQAVGCGQDDGLHICE CCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCEEEECCCCCCCCEEEH DEVILERVDAAGRPVTPDEPAARTLATGLAGRTFPFVRYDLGDEITLLPGRCACGSSMPR HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCH VADIAGRRDDDFRYGPRVVPASAFRYVLGTDPLISEYQVRQTAGGAEVLVVGSPDAATVA HHHHCCCCCCCCCCCCEECCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHH AALGCSLRPYGLTDPDISVSIVERIPRHVSTGKLKRFIALSG HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHEEEECC >Mature Secondary Structure MCVSREDPKAVYQRLRTAHLSAVRAALEDHVARLAWPRQRIERYRTERLRSLLGFARERS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC PFHAARMHDIDPATATVDDLARLPAMVKQDVQNEWDRIVTTPDIDRAGAERVLARQGWFS CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC YTPAGLQVFSSGGSSGVRGVYVWDWEQFVTLACLAWRWQARAERAAGSAGRPARLAVVEA CCCHHHHEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC GEPPHASTPLFDVATGPSTRTVVIPAAAPFDQVLHAVADARPTHLVGYASVIGRLARATI CCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AGELDIRPVRVSTNSEPLSPQDRHAIGAAWGAPVHNLWGSTEIGVQAVGCGQDDGLHICE CCCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCHHHHCCCCCCCEEEECCCCCCCCEEEH DEVILERVDAAGRPVTPDEPAARTLATGLAGRTFPFVRYDLGDEITLLPGRCACGSSMPR HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCCCCCCCCCH VADIAGRRDDDFRYGPRVVPASAFRYVLGTDPLISEYQVRQTAGGAEVLVVGSPDAATVA HHHHCCCCCCCCCCCCEECCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHH AALGCSLRPYGLTDPDISVSIVERIPRHVSTGKLKRFIALSG HHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA