| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318358
Identifier: 158318358
GI number: 158318358
Start: 8056340
End: 8056690
Strand: Direct
Name: 158318358
Synonym: Franean1_6623
Alternate gene names: NA
Gene position: 8056340-8056690 (Clockwise)
Preceding gene: 158318354
Following gene: 158318359
Centisome position: 89.69
GC content: 65.53
Gene sequence:
>351_bases ATGCAGGTGGACCCAGCTGTGCTGGAGCAGCTCACCGACGACCAGCAGGCGCGGATCCAGAAGGGACACAGCGCGTTCAT CGCCGCCACCAAGGAGCGCGGTGAGTTCATTGCGACTCAGGCCCTCGCCGACCCCAGCCAGTCGAAGATCATTCGCAGCT CCGGGGGACAGCCCGAGGTGACCGACGGACCGTTCGTCGAGAGCAAGGAGTTCATGGGCGGCTTCTATCTCCTGGACGTC GAGGACGAGGCCCGGGCGGTGGAGCTGGCCCTGCAGATCCCCGATGCCAACATTCCCGGCCTCGCTCTCGAGCTTCGGCC GGTGATGTTCGCCGATCTGGGAGAGGGATGA
Upstream 100 bases:
>100_bases TGCGTAGTGTCGCGGCAGCCATGTCGGCGACGACCACCTGGTGAGCCGCCACGCGGGTGGCCGCTCCACCAAGGAGGAGA TCGTGAAGTATCTGATCATC
Downstream 100 bases:
>100_bases TCCCAGTTGAACCCCTCGGCGGGGGCCAGTGGCGCGAGCTCGCGCGACAGGCCCTCGCCCGGCTGCTGCGCAGCCATGGC AGCGCCCAGTTCGACCTGTG
Product: DGPFAETKE family protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Like Protein; Dgpfaetke Family Protein; Ycii-Related Protein; Dgpf Domain Protein; DGPF Domain Superfamily; DGPFAETKE Domain-Containing Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MQVDPAVLEQLTDDQQARIQKGHSAFIAATKERGEFIATQALADPSQSKIIRSSGGQPEVTDGPFVESKEFMGGFYLLDV EDEARAVELALQIPDANIPGLALELRPVMFADLGEG
Sequences:
>Translated_116_residues MQVDPAVLEQLTDDQQARIQKGHSAFIAATKERGEFIATQALADPSQSKIIRSSGGQPEVTDGPFVESKEFMGGFYLLDV EDEARAVELALQIPDANIPGLALELRPVMFADLGEG >Mature_116_residues MQVDPAVLEQLTDDQQARIQKGHSAFIAATKERGEFIATQALADPSQSKIIRSSGGQPEVTDGPFVESKEFMGGFYLLDV EDEARAVELALQIPDANIPGLALELRPVMFADLGEG
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12515; Mature: 12515
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVDPAVLEQLTDDQQARIQKGHSAFIAATKERGEFIATQALADPSQSKIIRSSGGQPEV CCCCHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCEEEHHHHCCCCCHHHHHCCCCCCCC TDGPFVESKEFMGGFYLLDVEDEARAVELALQIPDANIPGLALELRPVMFADLGEG CCCCCCCCHHHCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCEEEEECCCC >Mature Secondary Structure MQVDPAVLEQLTDDQQARIQKGHSAFIAATKERGEFIATQALADPSQSKIIRSSGGQPEV CCCCHHHHHHHCCCHHHHHHCCCEEEEEEECCCCCEEEHHHHCCCCCHHHHHCCCCCCCC TDGPFVESKEFMGGFYLLDVEDEARAVELALQIPDANIPGLALELRPVMFADLGEG CCCCCCCCHHHCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA