Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318342

Identifier: 158318342

GI number: 158318342

Start: 8040847

End: 8041869

Strand: Reverse

Name: 158318342

Synonym: Franean1_6607

Alternate gene names: NA

Gene position: 8041869-8040847 (Counterclockwise)

Preceding gene: 158318344

Following gene: 158318340

Centisome position: 89.53

GC content: 69.4

Gene sequence:

>1023_bases
ATGAAGATCGCACTCAATGGCGCGAGCGGATTCACCGGCCGCCTGGCGGTCGCGGAACTCGCCCGCCGCGGCATCGACGC
GGTGCTCGTCGGGCGCGACCCCGAACGGCTGCGTGCGGCCGCGGCCGGTACCGGCTTCGAGGTCCGGATCGCGGACATCG
GCGACCAGGACGCATTGAGGTCCGCGTTCGGTGACGTTGACGCGGTTGTCAACACGGCCGGACCGTTTGCCCGACTCGGC
GCACCTGTCGTGCGCGCCGCAATCGCTGCCGAGGCGCACTATGTCGACACGACCGGCGAGCAGCAGTACATCAGCGATGT
CTTTGGCGCCTTTGCCAGCGCCGCCGCGGATGCTGGCGTGACGATCGTTCCGGCGATGGCCGACGACGGCGGCCCGAGCG
ACTTCATCGGCCACCTGGTCGGAGAGGCCGCCGGGACGGTGGACGTGATGACAGCGGCCCTCTGGTACCGCGACGGTGGC
TTCAGCCGCGGGACGCTGCGATCGCTCGACCCGGACCTGCTGTTCGACGGCGCACTGCGGTATGAGAACGGCGGCTGGAC
GACGTATGCCGAGCCGAGTCGTCTGAGCTGGCGCTTCCCGGGCGCGGCCGACGCCGTGCGAGTGGGGAAGGCCGCGCTTC
CACCGGTGGTGACGGTGCCGAGGCACGTGCCAGTCAGGAGCATGGAGGGTCTGCTCGGCGGGTCTTTCGACCAGCTGACG
GGCGGGATCGAGCCCGCGTTCATCGACTCGCTGCCGGAAGGGCCCGACGACGCGCAGCGGAGACAGTCAAAGTGGACGAT
CTGCGTTGAGGCGGTCACGTCTGCTGGACGCGCCGCGTTCGGCGAGGTCGAGGGCACAGACGGGTACGGAAAGACCGCGG
TGATCGCGGTGGAAGCGGCGCGCAGGCTGGTGGTGAACGGGGCCAATGCTGGTGTCCTGGCGCCGTCGCAGGCATTCGAT
CCGGAATCGTTCCTGGGTTTCCTGTCGGGACACGGCGTGCGCTGGCTGGTCACCGAAGGCTGA

Upstream 100 bases:

>100_bases
GGACGATCGAACATGAAGGCGGGACATCTAGACATGGATCGTCCCGCTGAGCCGGTCCTACGGTCGATCTCGACAGCGGC
ATCCGAAGCTGGGAGACGAC

Downstream 100 bases:

>100_bases
GCCAGGGCGACGACCAGCGCCTTTGTACTACTCCGCGAGCCGGCGACGGCTCGGGCAGACTGGAGTCGACGTGATCCCGG
CGTCGGACGGGGCCAGCCCG

Product: saccharopine dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKIALNGASGFTGRLAVAELARRGIDAVLVGRDPERLRAAAAGTGFEVRIADIGDQDALRSAFGDVDAVVNTAGPFARLG
APVVRAAIAAEAHYVDTTGEQQYISDVFGAFASAAADAGVTIVPAMADDGGPSDFIGHLVGEAAGTVDVMTAALWYRDGG
FSRGTLRSLDPDLLFDGALRYENGGWTTYAEPSRLSWRFPGAADAVRVGKAALPPVVTVPRHVPVRSMEGLLGGSFDQLT
GGIEPAFIDSLPEGPDDAQRRQSKWTICVEAVTSAGRAAFGEVEGTDGYGKTAVIAVEAARRLVVNGANAGVLAPSQAFD
PESFLGFLSGHGVRWLVTEG

Sequences:

>Translated_340_residues
MKIALNGASGFTGRLAVAELARRGIDAVLVGRDPERLRAAAAGTGFEVRIADIGDQDALRSAFGDVDAVVNTAGPFARLG
APVVRAAIAAEAHYVDTTGEQQYISDVFGAFASAAADAGVTIVPAMADDGGPSDFIGHLVGEAAGTVDVMTAALWYRDGG
FSRGTLRSLDPDLLFDGALRYENGGWTTYAEPSRLSWRFPGAADAVRVGKAALPPVVTVPRHVPVRSMEGLLGGSFDQLT
GGIEPAFIDSLPEGPDDAQRRQSKWTICVEAVTSAGRAAFGEVEGTDGYGKTAVIAVEAARRLVVNGANAGVLAPSQAFD
PESFLGFLSGHGVRWLVTEG
>Mature_340_residues
MKIALNGASGFTGRLAVAELARRGIDAVLVGRDPERLRAAAAGTGFEVRIADIGDQDALRSAFGDVDAVVNTAGPFARLG
APVVRAAIAAEAHYVDTTGEQQYISDVFGAFASAAADAGVTIVPAMADDGGPSDFIGHLVGEAAGTVDVMTAALWYRDGG
FSRGTLRSLDPDLLFDGALRYENGGWTTYAEPSRLSWRFPGAADAVRVGKAALPPVVTVPRHVPVRSMEGLLGGSFDQLT
GGIEPAFIDSLPEGPDDAQRRQSKWTICVEAVTSAGRAAFGEVEGTDGYGKTAVIAVEAARRLVVNGANAGVLAPSQAFD
PESFLGFLSGHGVRWLVTEG

Specific function: Unknown

COG id: COG3268

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]

Homologues:

Organism=Drosophila melanogaster, GI24644140, Length=146, Percent_Identity=33.5616438356164, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644142, Length=146, Percent_Identity=33.5616438356164, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356081, Length=146, Percent_Identity=33.5616438356164, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24646278, Length=140, Percent_Identity=32.8571428571429, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR005097 [H]

Pfam domain/function: PF03435 Saccharop_dh [H]

EC number: NA

Molecular weight: Translated: 35246; Mature: 35246

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIALNGASGFTGRLAVAELARRGIDAVLVGRDPERLRAAAAGTGFEVRIADIGDQDALR
CEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCHHHHH
SAFGDVDAVVNTAGPFARLGAPVVRAAIAAEAHYVDTTGEQQYISDVFGAFASAAADAGV
HHHCCHHHHHHCCCCHHHHCHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHCCCCC
TIVPAMADDGGPSDFIGHLVGEAAGTVDVMTAALWYRDGGFSRGTLRSLDPDLLFDGALR
EEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEE
YENGGWTTYAEPSRLSWRFPGAADAVRVGKAALPPVVTVPRHVPVRSMEGLLGGSFDQLT
ECCCCEEEECCCCCCEEECCCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHH
GGIEPAFIDSLPEGPDDAQRRQSKWTICVEAVTSAGRAAFGEVEGTDGYGKTAVIAVEAA
CCCCHHHHHCCCCCCCHHHHHHCCHHEEEEHHHHCCCCCCCCCCCCCCCCCEEEEEEEHH
RRLVVNGANAGVLAPSQAFDPESFLGFLSGHGVRWLVTEG
HEEEEECCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MKIALNGASGFTGRLAVAELARRGIDAVLVGRDPERLRAAAAGTGFEVRIADIGDQDALR
CEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCEEEEECCCCHHHHH
SAFGDVDAVVNTAGPFARLGAPVVRAAIAAEAHYVDTTGEQQYISDVFGAFASAAADAGV
HHHCCHHHHHHCCCCHHHHCHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHCCCCC
TIVPAMADDGGPSDFIGHLVGEAAGTVDVMTAALWYRDGGFSRGTLRSLDPDLLFDGALR
EEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEE
YENGGWTTYAEPSRLSWRFPGAADAVRVGKAALPPVVTVPRHVPVRSMEGLLGGSFDQLT
ECCCCEEEECCCCCCEEECCCCHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCCHHHHH
GGIEPAFIDSLPEGPDDAQRRQSKWTICVEAVTSAGRAAFGEVEGTDGYGKTAVIAVEAA
CCCCHHHHHCCCCCCCHHHHHHCCHHEEEEHHHHCCCCCCCCCCCCCCCCCEEEEEEEHH
RRLVVNGANAGVLAPSQAFDPESFLGFLSGHGVRWLVTEG
HEEEEECCCCCEECCCCCCCHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]