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The map label for this gene is 158318339

Identifier: 158318339

GI number: 158318339

Start: 8038103

End: 8038678

Strand: Reverse

Name: 158318339

Synonym: Franean1_6604

Alternate gene names: NA

Gene position: 8038678-8038103 (Counterclockwise)

Preceding gene: 158318340

Following gene: 158318338

Centisome position: 89.5

GC content: 66.84

Gene sequence:

>576_bases
GTGGGACTGCACCTGAGCCAGATCGAAGAGGCCGACGAGCTGCTGACGAACGACCCACTGGCGCTGCTGATCGGCATGGT
TCTGGACCAGCAGATCCCGTTGGAGCGGGCGTTCGCGGCGCCGTACGAGCTGACGAAACGGCTCGGGCGTTCGCTCGACG
TCACCGAGCTTGCCTCCTACGACCCGGACGAGCTGGCCTCGGTCTTCTCCCAGCAGCCGGCGCTGCACCGGTTCCCCGGT
TCGATGGCCAAGCGGGTGCAGGCGCTCTGTCAACTGATCGTCGACAGGTACAACGGCGACCCGGCCGCGGTGTGGGCGAC
CGCCGCTGACGGCAAGCAGCTGCTCCGCCAGATTAGCGCCCTGCCCGGCTTTGGCCAGCAGAAGGCCAAGATCTTCATTG
CGCTGCTCGGCAAGCAGCTCGCCGTCACCCCACCCGGCTGGCGCGAGGCAAGCGACCCCTTCAGCGAGGATGGCAGCCTC
CGCTCCATTGCCGACATCACCAGCCCCGAAACCCGCATCCAGGTCCGCGACTTCAAGAAGCAGCTGAAGGCTGCGGCGAA
GACCGCAGCCTCTTGA

Upstream 100 bases:

>100_bases
CCGCCGGCCAGCCATCCAGGCGAAGACGTGGCCGAGGCCAGGACCCGGGCCGAATCCGCGCGACGCGAGGCCGCCGCGAC
GGTTCGGCTACGGTTATGCC

Downstream 100 bases:

>100_bases
CCCACAGGTTTGTGGGCGAGCTTCCCGCCCTGTCCGCACGGCGTCCGCTGGGCGGCCAGGGCCGTCCGATTGCGTCAGGC
GCCGTGTTGACTCGCTGTGG

Product: HhH-GPD family protein

Products: NA

Alternate protein names: HhH-GPD Protein; HhH-GPD; Hhh-Gpd Family DNA Repair Protein; Base Excision DNA Repair Protein HhH-GPD Family Protein; HhH-GPD Family Base Excision DNA Repair Protein; HhH-GPD Superfamily Base Excision DNA Repair Protein

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MGLHLSQIEEADELLTNDPLALLIGMVLDQQIPLERAFAAPYELTKRLGRSLDVTELASYDPDELASVFSQQPALHRFPG
SMAKRVQALCQLIVDRYNGDPAAVWATAADGKQLLRQISALPGFGQQKAKIFIALLGKQLAVTPPGWREASDPFSEDGSL
RSIADITSPETRIQVRDFKKQLKAAAKTAAS

Sequences:

>Translated_191_residues
MGLHLSQIEEADELLTNDPLALLIGMVLDQQIPLERAFAAPYELTKRLGRSLDVTELASYDPDELASVFSQQPALHRFPG
SMAKRVQALCQLIVDRYNGDPAAVWATAADGKQLLRQISALPGFGQQKAKIFIALLGKQLAVTPPGWREASDPFSEDGSL
RSIADITSPETRIQVRDFKKQLKAAAKTAAS
>Mature_190_residues
GLHLSQIEEADELLTNDPLALLIGMVLDQQIPLERAFAAPYELTKRLGRSLDVTELASYDPDELASVFSQQPALHRFPGS
MAKRVQALCQLIVDRYNGDPAAVWATAADGKQLLRQISALPGFGQQKAKIFIALLGKQLAVTPPGWREASDPFSEDGSLR
SIADITSPETRIQVRDFKKQLKAAAKTAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20826; Mature: 20695

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLHLSQIEEADELLTNDPLALLIGMVLDQQIPLERAFAAPYELTKRLGRSLDVTELASY
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCHHHHHCC
DPDELASVFSQQPALHRFPGSMAKRVQALCQLIVDRYNGDPAAVWATAADGKQLLRQISA
CHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHH
LPGFGQQKAKIFIALLGKQLAVTPPGWREASDPFSEDGSLRSIADITSPETRIQVRDFKK
CCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH
QLKAAAKTAAS
HHHHHHHHCCC
>Mature Secondary Structure 
GLHLSQIEEADELLTNDPLALLIGMVLDQQIPLERAFAAPYELTKRLGRSLDVTELASY
CCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHCCCCCHHHHHCC
DPDELASVFSQQPALHRFPGSMAKRVQALCQLIVDRYNGDPAAVWATAADGKQLLRQISA
CHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHH
LPGFGQQKAKIFIALLGKQLAVTPPGWREASDPFSEDGSLRSIADITSPETRIQVRDFKK
CCCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHH
QLKAAAKTAAS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA