Click here to switch to the map view.

The map label for this gene is 158318328

Identifier: 158318328

GI number: 158318328

Start: 8023418

End: 8024704

Strand: Direct

Name: 158318328

Synonym: Franean1_6593

Alternate gene names: NA

Gene position: 8023418-8024704 (Clockwise)

Preceding gene: 158318318

Following gene: 158318330

Centisome position: 89.33

GC content: 72.8

Gene sequence:

>1287_bases
ATGGAGCCGAATCCCCCGCCGCGAAACGACAACCTGCGGTTTCGGTTGGCCATCCTCACCGGTGACCGGATACGGCGAGC
CGGTGCCCTTCTCCTCGGTGACGCGGGCCGCGGGTTCCGCCGCTGGTGCGCTCTGCCGGTGGCGGTGCTGGCCGTCGCGG
CGACGGGCGCGCTGTTCGCCGTCGACGCCGGGAACACCAACGCGGCGCAGGCTCACCCGGCGGGCGGCCCACCCGGCGCG
GCGACCGCGGCCGCGGACCTCTCGGACAGCCCCGCCACGCCGGAGCGCGCTCCTACCGGGAGAGGTGATGCGTCCGCGCC
GGGTTCTCCCGGGACGTCGCGGCCCGGCTCGGCGTCGCCATCTCCCCCACTCACCTCGACTCAGCCGCCGGCGCAGCCTC
CGCCCTCGTCGGCGTCGCGCCCCGGCCCGGCCCGCCCCGAGGCCGGTTCCGCCGAACGGGTGATTCCGCCGCCGGCCGCC
GGGCTCACCGCTGAGCCCGGTGACGGCCGAGCCCGGATCTGCTGGAATCCCGCGCCGAACGCCACCGGCTACGTCATGTA
CCACCGGGACGTCACCACCGGCGAAGGCTGGTACCGGGTCCCCTACCCCGTCACCGACACCTGCAGCACCGTCACCCAGC
TCACCAACAGCCACACCTACGAGTTCAAGGTCCGATCGAGCAACGCCAACGGCGAGGCCGACTACTCAGGGACGGTGCAG
GCACGGCCGGCCGGCACGATCCCGCCACCGGCCACCGGGCTCACCGCGGCCCCCGGGAACGGCTCCGCCCGGATCTGCTG
GAATCCCGCGCCGAACGCCACCGGCTACGTCATGTACCACCGGGACGTCACCACCGGCGAAGGCTGGTACCGGGTCCCCT
ACCCCGTCACCGACACCTGCAGCACCGTCACCCAGCTCACCAACAGCCACACCTACGAGTTCAAGGTCCGATCGAGCAAC
GCCAACGGCGAGGCCGACTACTCAGGGACGGTGCAGGCACGGCCGGCCGGCACGATCCCGCCACCGGCCACCGGGCTCAC
CGCGGCCCCCGGGAACGGCTCCGCCCGGATCTGCTGGAATCCCGCGCCGAACGCCACCGGCTACGTCATGTACCACCGGG
ACGTCACCACCGGCGAAGGCTGGTACCGGGTCCCCTACCCCGTCACCGACACCTGCAGCACCGTCACCCAGCTCACCAAC
AGCCACACCTACGAGTTCAAGGTCCGATCGAGCAACGCCAACGGCGAGGCCGACTACTCGGGCACCGCCGCCGCCACGCC
CGGCTGA

Upstream 100 bases:

>100_bases
GTGCCCTGTTTCGGACCTGGCCGACAGCGCTGGTGGGGACCGCCCGGATCTCCGATGACCGCGTTCGTCACGAGGCCTGA
CTGGTGTCGGAAAGGCGTCC

Downstream 100 bases:

>100_bases
CCCGGTCTGCGGTAGCGTCGCCCGGCACCGGCGAGGGCTCACCCGGCAGCTCGAGGATGGTCAAGGTGACGCATGCGGCG
GGGACCGGACCTGTCCGGCC

Product: fibronectin type III domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MEPNPPPRNDNLRFRLAILTGDRIRRAGALLLGDAGRGFRRWCALPVAVLAVAATGALFAVDAGNTNAAQAHPAGGPPGA
ATAAADLSDSPATPERAPTGRGDASAPGSPGTSRPGSASPSPPLTSTQPPAQPPPSSASRPGPARPEAGSAERVIPPPAA
GLTAEPGDGRARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYSGTVQ
ARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSN
ANGEADYSGTVQARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTN
SHTYEFKVRSSNANGEADYSGTAAATPG

Sequences:

>Translated_428_residues
MEPNPPPRNDNLRFRLAILTGDRIRRAGALLLGDAGRGFRRWCALPVAVLAVAATGALFAVDAGNTNAAQAHPAGGPPGA
ATAAADLSDSPATPERAPTGRGDASAPGSPGTSRPGSASPSPPLTSTQPPAQPPPSSASRPGPARPEAGSAERVIPPPAA
GLTAEPGDGRARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYSGTVQ
ARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSN
ANGEADYSGTVQARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTN
SHTYEFKVRSSNANGEADYSGTAAATPG
>Mature_428_residues
MEPNPPPRNDNLRFRLAILTGDRIRRAGALLLGDAGRGFRRWCALPVAVLAVAATGALFAVDAGNTNAAQAHPAGGPPGA
ATAAADLSDSPATPERAPTGRGDASAPGSPGTSRPGSASPSPPLTSTQPPAQPPPSSASRPGPARPEAGSAERVIPPPAA
GLTAEPGDGRARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYSGTVQ
ARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSN
ANGEADYSGTVQARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTN
SHTYEFKVRSSNANGEADYSGTAAATPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI291045225, Length=258, Percent_Identity=30.6201550387597, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI291045228, Length=258, Percent_Identity=30.6201550387597, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI291045230, Length=258, Percent_Identity=30.6201550387597, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI291045223, Length=258, Percent_Identity=30.6201550387597, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI115532976, Length=242, Percent_Identity=28.5123966942149, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI115532974, Length=242, Percent_Identity=28.5123966942149, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI32565889, Length=257, Percent_Identity=29.1828793774319, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32565886, Length=257, Percent_Identity=29.1828793774319, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193207037, Length=257, Percent_Identity=29.1828793774319, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44357; Mature: 44357

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPNPPPRNDNLRFRLAILTGDRIRRAGALLLGDAGRGFRRWCALPVAVLAVAATGALFA
CCCCCCCCCCCEEEEEEEEECCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE
VDAGNTNAAQAHPAGGPPGAATAAADLSDSPATPERAPTGRGDASAPGSPGTSRPGSASP
EECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPPLTSTQPPAQPPPSSASRPGPARPEAGSAERVIPPPAAGLTAEPGDGRARICWNPAPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
ATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYSGTVQ
CCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEE
ARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTC
ECCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEECCCCCCHHH
STVTQLTNSHTYEFKVRSSNANGEADYSGTVQARPAGTIPPPATGLTAAPGNGSARICWN
HHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCEEEEEC
PAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYS
CCCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
GTAAATPG
CCCCCCCC
>Mature Secondary Structure
MEPNPPPRNDNLRFRLAILTGDRIRRAGALLLGDAGRGFRRWCALPVAVLAVAATGALFA
CCCCCCCCCCCEEEEEEEEECCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE
VDAGNTNAAQAHPAGGPPGAATAAADLSDSPATPERAPTGRGDASAPGSPGTSRPGSASP
EECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPPLTSTQPPAQPPPSSASRPGPARPEAGSAERVIPPPAAGLTAEPGDGRARICWNPAPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
ATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYSGTVQ
CCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEE
ARPAGTIPPPATGLTAAPGNGSARICWNPAPNATGYVMYHRDVTTGEGWYRVPYPVTDTC
ECCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCEEEEEEEECCCCCCEEECCCCCCHHH
STVTQLTNSHTYEFKVRSSNANGEADYSGTVQARPAGTIPPPATGLTAAPGNGSARICWN
HHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCEEEEEC
PAPNATGYVMYHRDVTTGEGWYRVPYPVTDTCSTVTQLTNSHTYEFKVRSSNANGEADYS
CCCCCCEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
GTAAATPG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA