Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is fabG [H]

Identifier: 158318321

GI number: 158318321

Start: 8015252

End: 8016160

Strand: Reverse

Name: fabG [H]

Synonym: Franean1_6586

Alternate gene names: 158318321

Gene position: 8016160-8015252 (Counterclockwise)

Preceding gene: 158318322

Following gene: 158318320

Centisome position: 89.25

GC content: 75.58

Gene sequence:

>909_bases
GTGGTCACCTCGGCGGTCGTCATCACGGGAGCGGCATCCGGGATCGGGCGGGCGTGCGCGGAGCTGTTCGCCGCGCGGGG
GTTCGGCGTGGTCGCCGTGGACGTCGACGAGGTCGGCCTGGCGGCGCTGACCCGAGCACAGTCGCGCGCCCCGCGGCCCG
CCGTGGCCCCGGCGGATCCCCGGACCGCGGAGGATCCCCGGACCGCGGCGGATGCCGGTGCCGTGACGGGTGCGGACTCC
CGGCCGGCGGGCGGGCCGGAGCCGCGGATCGTCCCGATGGTCGGGGACGTCTCGGTCGAGGAGACCGGGGCCGCCATGGC
GGAGCTGGCGCTCGCGAGCTTCGGGCGGCTGGACGTCGCGGTGCTCAACGCCGGGATCGGCACGACGCTGCCGTGGGAGG
CCCCGGGCGCGATCGACCGGCTGGACCGGATCCTCGCCGTCAACGTGCGGGGCGTCGCGATCGGGATCCGTTCGGTGGTC
CCCGCGCTCCGGGCGGGCGGTGGCGGCTCAATCGTCGTGACCGCCTCCAGCGGCGGGTTGCAGAGCGAACCGGGGAACTG
GGCGTACAACGCGTCCAAGGCGGCTGTGATCAACATGGTGCGGGCCGCGGCGCTCGACCACGCCGCCCAGAACATCCGGA
TCAACGCCGTCGCCCCCGGCCTGACCGAGACGGCGCTGACCGCGCGCCACCGCACCGACCCGGGGTCCACCGCGGCGGTG
AGCCGCCGCATTCCGATGGGGCGCTGGGGGCAGCCGGGCGAGCTGGCCTCGGCCGTCTGGTTCCTGGCCTCCGCCGAGTC
GTCCTACATCACCGGAACGACGCTGGTCGCCGACGGGGGCCTGACCGCGCACCACGGGGTCGTGCCTCTACCGGCTCCGG
AGGTCGCGCTGCCGTCTCCGGAAATCTGA

Upstream 100 bases:

>100_bases
CCGCGACCCGCCAGGCTGATCTCGGCGCGGCCGGCCGGGATCCGTCCGGCGGGCGGGACTTGCCGTGCTGGTGAGGTCTC
TCGGAGCTCGTGGAGGATGT

Downstream 100 bases:

>100_bases
CCCGGAACGTACGAAATTACGACTCGCCCGCATCAGGGGCCTGTCAACAGGTCTGGGTGGTGCCCGGACGAACGCGGGGA
CCATTTCCAACTTGATGCTC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MVTSAVVITGAASGIGRACAELFAARGFGVVAVDVDEVGLAALTRAQSRAPRPAVAPADPRTAEDPRTAADAGAVTGADS
RPAGGPEPRIVPMVGDVSVEETGAAMAELALASFGRLDVAVLNAGIGTTLPWEAPGAIDRLDRILAVNVRGVAIGIRSVV
PALRAGGGGSIVVTASSGGLQSEPGNWAYNASKAAVINMVRAAALDHAAQNIRINAVAPGLTETALTARHRTDPGSTAAV
SRRIPMGRWGQPGELASAVWFLASAESSYITGTTLVADGGLTAHHGVVPLPAPEVALPSPEI

Sequences:

>Translated_302_residues
MVTSAVVITGAASGIGRACAELFAARGFGVVAVDVDEVGLAALTRAQSRAPRPAVAPADPRTAEDPRTAADAGAVTGADS
RPAGGPEPRIVPMVGDVSVEETGAAMAELALASFGRLDVAVLNAGIGTTLPWEAPGAIDRLDRILAVNVRGVAIGIRSVV
PALRAGGGGSIVVTASSGGLQSEPGNWAYNASKAAVINMVRAAALDHAAQNIRINAVAPGLTETALTARHRTDPGSTAAV
SRRIPMGRWGQPGELASAVWFLASAESSYITGTTLVADGGLTAHHGVVPLPAPEVALPSPEI
>Mature_302_residues
MVTSAVVITGAASGIGRACAELFAARGFGVVAVDVDEVGLAALTRAQSRAPRPAVAPADPRTAEDPRTAADAGAVTGADS
RPAGGPEPRIVPMVGDVSVEETGAAMAELALASFGRLDVAVLNAGIGTTLPWEAPGAIDRLDRILAVNVRGVAIGIRSVV
PALRAGGGGSIVVTASSGGLQSEPGNWAYNASKAAVINMVRAAALDHAAQNIRINAVAPGLTETALTARHRTDPGSTAAV
SRRIPMGRWGQPGELASAVWFLASAESSYITGTTLVADGGLTAHHGVVPLPAPEVALPSPEI

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=171, Percent_Identity=32.7485380116959, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI15277342, Length=277, Percent_Identity=30.6859205776173, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI126723750, Length=139, Percent_Identity=34.5323741007194, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI40254992, Length=277, Percent_Identity=29.6028880866426, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI10190704, Length=290, Percent_Identity=29.6551724137931, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI59889578, Length=220, Percent_Identity=30.4545454545455, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI19923817, Length=289, Percent_Identity=27.3356401384083, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7705925, Length=279, Percent_Identity=28.3154121863799, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI66933014, Length=174, Percent_Identity=31.0344827586207, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI4758504, Length=286, Percent_Identity=28.6713286713287, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI5031737, Length=192, Percent_Identity=26.5625, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI87082100, Length=283, Percent_Identity=30.3886925795053, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1789208, Length=199, Percent_Identity=32.6633165829146, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789378, Length=265, Percent_Identity=30.9433962264151, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1790717, Length=171, Percent_Identity=34.5029239766082, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787335, Length=275, Percent_Identity=30.5454545454545, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI2367175, Length=284, Percent_Identity=31.3380281690141, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788459, Length=279, Percent_Identity=30.1075268817204, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787905, Length=274, Percent_Identity=28.4671532846715, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786812, Length=229, Percent_Identity=33.6244541484716, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082160, Length=171, Percent_Identity=32.1637426900585, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=289, Percent_Identity=30.7958477508651, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=285, Percent_Identity=29.1228070175439, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=304, Percent_Identity=27.3026315789474, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=199, Percent_Identity=30.1507537688442, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=288, Percent_Identity=28.4722222222222, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=286, Percent_Identity=27.972027972028, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17560676, Length=178, Percent_Identity=30.8988764044944, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=286, Percent_Identity=29.3706293706294, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=303, Percent_Identity=27.0627062706271, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=303, Percent_Identity=29.3729372937294, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115534694, Length=282, Percent_Identity=29.0780141843972, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=296, Percent_Identity=27.7027027027027, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=291, Percent_Identity=27.8350515463918, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=278, Percent_Identity=28.4172661870504, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17562990, Length=293, Percent_Identity=27.6450511945392, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=285, Percent_Identity=25.9649122807018, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=290, Percent_Identity=29.6551724137931, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=287, Percent_Identity=27.8745644599303, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=283, Percent_Identity=28.2685512367491, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=290, Percent_Identity=27.2413793103448, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=296, Percent_Identity=26.3513513513513, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=300, Percent_Identity=27, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=286, Percent_Identity=30.4195804195804, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=289, Percent_Identity=28.719723183391, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=288, Percent_Identity=26.3888888888889, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=287, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644339, Length=288, Percent_Identity=32.2916666666667, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21355319, Length=192, Percent_Identity=35.9375, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI23397609, Length=297, Percent_Identity=30.976430976431, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI21357041, Length=198, Percent_Identity=35.8585858585859, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=288, Percent_Identity=31.9444444444444, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24644337, Length=170, Percent_Identity=37.0588235294118, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24643142, Length=277, Percent_Identity=27.4368231046931, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24639444, Length=279, Percent_Identity=28.673835125448, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17737361, Length=298, Percent_Identity=29.8657718120805, Blast_Score=75, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 30257; Mature: 30257

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MVTSAVVITGAASGIGRACAELFAARGFGVVAVDVDEVGLAALTRAQSRAPRPAVAPADP
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC
RTAEDPRTAADAGAVTGADSRPAGGPEPRIVPMVGDVSVEETGAAMAELALASFGRLDVA
CCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
VLNAGIGTTLPWEAPGAIDRLDRILAVNVRGVAIGIRSVVPALRAGGGGSIVVTASSGGL
EEECCCCCCCCCCCCCHHHHHHHEEEEECCCEEEEHHHHHHHHHCCCCCEEEEEECCCCC
QSEPGNWAYNASKAAVINMVRAAALDHAAQNIRINAVAPGLTETALTARHRTDPGSTAAV
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCCHHHH
SRRIPMGRWGQPGELASAVWFLASAESSYITGTTLVADGGLTAHHGVVPLPAPEVALPSP
HHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECEEEEECCCCCCCCCEECCCCCCCCCCCC
EI
CC
>Mature Secondary Structure
MVTSAVVITGAASGIGRACAELFAARGFGVVAVDVDEVGLAALTRAQSRAPRPAVAPADP
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC
RTAEDPRTAADAGAVTGADSRPAGGPEPRIVPMVGDVSVEETGAAMAELALASFGRLDVA
CCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
VLNAGIGTTLPWEAPGAIDRLDRILAVNVRGVAIGIRSVVPALRAGGGGSIVVTASSGGL
EEECCCCCCCCCCCCCHHHHHHHEEEEECCCEEEEHHHHHHHHHCCCCCEEEEEECCCCC
QSEPGNWAYNASKAAVINMVRAAALDHAAQNIRINAVAPGLTETALTARHRTDPGSTAAV
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCCHHHH
SRRIPMGRWGQPGELASAVWFLASAESSYITGTTLVADGGLTAHHGVVPLPAPEVALPSP
HHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECEEEEECCCCCCCCCEECCCCCCCCCCCC
EI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]