| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318283
Identifier: 158318283
GI number: 158318283
Start: 7964128
End: 7965345
Strand: Reverse
Name: 158318283
Synonym: Franean1_6548
Alternate gene names: NA
Gene position: 7965345-7964128 (Counterclockwise)
Preceding gene: 158318284
Following gene: 158318280
Centisome position: 88.68
GC content: 72.74
Gene sequence:
>1218_bases ATGAGGCTCGGGGACGGGAACGCGGAGGGCGGACGTGCGGGGTCGCTGCGGGTCCTCTATTCCATCTCCCACCCGCTCGG CCGGCCCGGCATCGCCACCACGGCTCTGTACCAGGTCAGAGGCCTGATCGCGGCCGGTTTCCAGGTGACCGTGTACTGCA CCAGCCTTGCGATCCCGGTACCCGCCACCCACCGGGTCGTGCAGACCATGGTCGCCCGAGGCGTGCGGATCCCGAACCGG GCGGTCGGAGTGCGGCGGGCGTACGCCTACCACGACTGGTGTTTGGCCAGGGAGCTCGCCCGGCGCCCGCACACCTACGA TGTCGTCCACGCCTGGCCACGGGGGTGCGTCCGTACCCTGCGCACCGCCCGCCGTATCGGGTTGCCCGCCTTCCGCGAGG TCTGCAGCCCGCACAGCCGGGCCGCATTCGACCTCGCCGGCCGGGAGGCGGCCGCGACGGGGGTCCGGCTGCCGCGACGG CACGCGCAGCGGGGCCGGTCCTGGCGGCTGCGGCTGGAGGAGGCGGAATACGCGGCGGCGTCCTGGCTGCTGTGCCCGTC TGACCATGTCGTACGGACCTTCATCGAACACGGTGTGGACGCCGGCCGCCTCGTCCGCCACCAGTACGGTTTCGACCCCG ACCGCTTCCGGCCGGCGCTTGGTCCGCGGCCCGCGGATCGGCCGTTCACCGTCGCCTTCGCCGGGCGGGGCGAACCGAAC AAGGGGCTGCACTACGCCCTGCGGGCCTGGCGGGACGCCGGAAGCCCGGGAACCTTCCTGATCTGCGGTGTGATCATGCC TGATTACCGGGCCCGCCTCGGCGAGCTGCTCGGGCTGCCCGGGGTCCGGGAACTCGGCTTCGTCAGTGACCTGGACCGGG TGCTGCGCGAGTCCGACGCGCTCGTGCTGCCCAGCGTGAGTGAAGGCAGCGCGCTGGTCACGCTGGAAGCGGCGGGCTCG GGGTGCATCCCGGTGGTCTCCGACGCCTGTGGATCGCCTACCCGGCATCTCATCGACGGACTTGTGCACCGTGCGACCGA CACTGCCGAGCTGACCCGTCACCTGCGACTGCTCGCAGAGGAACCGACCACTCGCGCCCGGCTGCGGGCTGCCTGCATCG CCGGCCGGGATGCTCACACCTGGGCGCGGGCCGGGGAACGGCTCGCGGAGATCTACCAGGCCGCGGTGCGTGCCCGCCCC GGAGGCGCTCCCGGCTGA
Upstream 100 bases:
>100_bases CGCGGAAGTCGCTGACCTGGAACCACGCCGGAACCATTCTCCACGCGGCCTATGAGCGGTCCAGGGCGGCCGCGGTAGAC GGCGCGGGGACGGACGCGGC
Downstream 100 bases:
>100_bases CGGCCCACGACGGCCGCACCGGCGACCACAGTGGTGCCCTGAACAGCGGAGACTTAGACGTGGACAGCGTGCTCTGGATC GGGCACCCCCGGGAGAAGCC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase-Like Protein; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRLGDGNAEGGRAGSLRVLYSISHPLGRPGIATTALYQVRGLIAAGFQVTVYCTSLAIPVPATHRVVQTMVARGVRIPNR AVGVRRAYAYHDWCLARELARRPHTYDVVHAWPRGCVRTLRTARRIGLPAFREVCSPHSRAAFDLAGREAAATGVRLPRR HAQRGRSWRLRLEEAEYAAASWLLCPSDHVVRTFIEHGVDAGRLVRHQYGFDPDRFRPALGPRPADRPFTVAFAGRGEPN KGLHYALRAWRDAGSPGTFLICGVIMPDYRARLGELLGLPGVRELGFVSDLDRVLRESDALVLPSVSEGSALVTLEAAGS GCIPVVSDACGSPTRHLIDGLVHRATDTAELTRHLRLLAEEPTTRARLRAACIAGRDAHTWARAGERLAEIYQAAVRARP GGAPG
Sequences:
>Translated_405_residues MRLGDGNAEGGRAGSLRVLYSISHPLGRPGIATTALYQVRGLIAAGFQVTVYCTSLAIPVPATHRVVQTMVARGVRIPNR AVGVRRAYAYHDWCLARELARRPHTYDVVHAWPRGCVRTLRTARRIGLPAFREVCSPHSRAAFDLAGREAAATGVRLPRR HAQRGRSWRLRLEEAEYAAASWLLCPSDHVVRTFIEHGVDAGRLVRHQYGFDPDRFRPALGPRPADRPFTVAFAGRGEPN KGLHYALRAWRDAGSPGTFLICGVIMPDYRARLGELLGLPGVRELGFVSDLDRVLRESDALVLPSVSEGSALVTLEAAGS GCIPVVSDACGSPTRHLIDGLVHRATDTAELTRHLRLLAEEPTTRARLRAACIAGRDAHTWARAGERLAEIYQAAVRARP GGAPG >Mature_405_residues MRLGDGNAEGGRAGSLRVLYSISHPLGRPGIATTALYQVRGLIAAGFQVTVYCTSLAIPVPATHRVVQTMVARGVRIPNR AVGVRRAYAYHDWCLARELARRPHTYDVVHAWPRGCVRTLRTARRIGLPAFREVCSPHSRAAFDLAGREAAATGVRLPRR HAQRGRSWRLRLEEAEYAAASWLLCPSDHVVRTFIEHGVDAGRLVRHQYGFDPDRFRPALGPRPADRPFTVAFAGRGEPN KGLHYALRAWRDAGSPGTFLICGVIMPDYRARLGELLGLPGVRELGFVSDLDRVLRESDALVLPSVSEGSALVTLEAAGS GCIPVVSDACGSPTRHLIDGLVHRATDTAELTRHLRLLAEEPTTRARLRAACIAGRDAHTWARAGERLAEIYQAAVRARP GGAPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44124; Mature: 44124
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGDGNAEGGRAGSLRVLYSISHPLGRPGIATTALYQVRGLIAAGFQVTVYCTSLAIPV CCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCC PATHRVVQTMVARGVRIPNRAVGVRRAYAYHDWCLARELARRPHTYDVVHAWPRGCVRTL CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RTARRIGLPAFREVCSPHSRAAFDLAGREAAATGVRLPRRHAQRGRSWRLRLEEAEYAAA HHHHHCCCHHHHHHCCCCCCCHHHHCCCHHHHHCCCCCHHHHHCCCCEEEEEHHHHHHHH SWLLCPSDHVVRTFIEHGVDAGRLVRHQYGFDPDRFRPALGPRPADRPFTVAFAGRGEPN HEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCC KGLHYALRAWRDAGSPGTFLICGVIMPDYRARLGELLGLPGVRELGFVSDLDRVLRESDA CCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC LVLPSVSEGSALVTLEAAGSGCIPVVSDACGSPTRHLIDGLVHRATDTAELTRHLRLLAE EEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC EPTTRARLRAACIAGRDAHTWARAGERLAEIYQAAVRARPGGAPG CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRLGDGNAEGGRAGSLRVLYSISHPLGRPGIATTALYQVRGLIAAGFQVTVYCTSLAIPV CCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCC PATHRVVQTMVARGVRIPNRAVGVRRAYAYHDWCLARELARRPHTYDVVHAWPRGCVRTL CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RTARRIGLPAFREVCSPHSRAAFDLAGREAAATGVRLPRRHAQRGRSWRLRLEEAEYAAA HHHHHCCCHHHHHHCCCCCCCHHHHCCCHHHHHCCCCCHHHHHCCCCEEEEEHHHHHHHH SWLLCPSDHVVRTFIEHGVDAGRLVRHQYGFDPDRFRPALGPRPADRPFTVAFAGRGEPN HEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCC KGLHYALRAWRDAGSPGTFLICGVIMPDYRARLGELLGLPGVRELGFVSDLDRVLRESDA CCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC LVLPSVSEGSALVTLEAAGSGCIPVVSDACGSPTRHLIDGLVHRATDTAELTRHLRLLAE EEECCCCCCCEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC EPTTRARLRAACIAGRDAHTWARAGERLAEIYQAAVRARPGGAPG CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA