Click here to switch to the map view.

The map label for this gene is nodL [H]

Identifier: 158318279

GI number: 158318279

Start: 7959364

End: 7960029

Strand: Reverse

Name: nodL [H]

Synonym: Franean1_6544

Alternate gene names: 158318279

Gene position: 7960029-7959364 (Counterclockwise)

Preceding gene: 158318280

Following gene: 158318278

Centisome position: 88.62

GC content: 68.47

Gene sequence:

>666_bases
ATGAAACGGACGCTGCGTGCGGTGTGTTCCGTTGTCGACCCGCGGATCTGGCTGCACATGCTGCGAATACTGCATTTCTA
CGGGTATTCCCATGTACTCCCGCGGCGGCGCGTCACCATGGGTGCCGGCGTACGCATGGCGCCGAACACCTCGATCCGTA
ACGGCGAACGCGTCTCCATCGGCAGCGGCACGCGCATTGGTGAAAGGTGCTGTCTGTGGGCCGGCGACGACCACGGGCGG
GTTGACATCGGCCGGCACACCCTGCTCGGACCGGGGGTTTTCATCACGGCATCGAACTACCGGATGCTGCCCGAAATTCC
AGCCACGTACCAGCCGAAGGATGAAAAGGACGTTCGGATCGGTACGGACGTCTGGCTCGGCGCGGGCGTGACGGTCGTCG
CGGGGGTGACGGTGGGCGATGGGTGCGTGGTCGGCGCCGGCGCGGTGGTGACCCGCTCCCTGCCGGAGGGATCCATCGCG
GTGGGCGCGCCGGCCCGGGTAGTGGGCCGGCGCGGGCCGACAGGCCGGACCCCGGACGTGCATCCGGGGACAGGGCGCGA
GAGCGACCTCGCAGTCTTCGCGATCGTCGCAGCGACTGCGGAGGGCACCGCCGACACGGGACACGGACACCGGGAGGCGG
AATGGCTGTCGACGTCTCAGTCCTGA

Upstream 100 bases:

>100_bases
TCACAGCGAAGGTGCTAGCCCGGCGCAAGGTTTGTTGTGGGAATCTCAGCTCCTGGGAACGCGACGACACCAGCCGCACC
TCGACGACGGGAGACATCTG

Downstream 100 bases:

>100_bases
TCGTCTCATACAACACCGGTGAAATGACGGCGACGTGCCTGGAGTCCCTCGAAGCCACGTCCGGCGGCCTGCGCATCGAG
GTCATAGTCGTGGACAATGC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRTLRAVCSVVDPRIWLHMLRILHFYGYSHVLPRRRVTMGAGVRMAPNTSIRNGERVSIGSGTRIGERCCLWAGDDHGR
VDIGRHTLLGPGVFITASNYRMLPEIPATYQPKDEKDVRIGTDVWLGAGVTVVAGVTVGDGCVVGAGAVVTRSLPEGSIA
VGAPARVVGRRGPTGRTPDVHPGTGRESDLAVFAIVAATAEGTADTGHGHREAEWLSTSQS

Sequences:

>Translated_221_residues
MKRTLRAVCSVVDPRIWLHMLRILHFYGYSHVLPRRRVTMGAGVRMAPNTSIRNGERVSIGSGTRIGERCCLWAGDDHGR
VDIGRHTLLGPGVFITASNYRMLPEIPATYQPKDEKDVRIGTDVWLGAGVTVVAGVTVGDGCVVGAGAVVTRSLPEGSIA
VGAPARVVGRRGPTGRTPDVHPGTGRESDLAVFAIVAATAEGTADTGHGHREAEWLSTSQS
>Mature_221_residues
MKRTLRAVCSVVDPRIWLHMLRILHFYGYSHVLPRRRVTMGAGVRMAPNTSIRNGERVSIGSGTRIGERCCLWAGDDHGR
VDIGRHTLLGPGVFITASNYRMLPEIPATYQPKDEKDVRIGTDVWLGAGVTVVAGVTVGDGCVVGAGAVVTRSLPEGSIA
VGAPARVVGRRGPTGRTPDVHPGTGRESDLAVFAIVAATAEGTADTGHGHREAEWLSTSQS

Specific function: Acetyltransferase implicated in the O-acetylation of Nod factors [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1788345, Length=187, Percent_Identity=29.9465240641711, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786537, Length=130, Percent_Identity=30, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR018357
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 23483; Mature: 23483

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTLRAVCSVVDPRIWLHMLRILHFYGYSHVLPRRRVTMGAGVRMAPNTSIRNGERVSI
CCHHHHHHHHHHCHHHHHHHHHHHHHHCHHHCCCCCEEEECCCEEECCCCCCCCCCEEEE
GSGTRIGERCCLWAGDDHGRVDIGRHTLLGPGVFITASNYRMLPEIPATYQPKDEKDVRI
CCCCCCCCEEEEEECCCCCEEEECCEEEECCCEEEEECCCEECCCCCCCCCCCCCCCEEE
GTDVWLGAGVTVVAGVTVGDGCVVGAGAVVTRSLPEGSIAVGAPARVVGRRGPTGRTPDV
CCCEEECCCEEEEEEEEECCCEEECCCCEEEECCCCCCEEECCCHHHHCCCCCCCCCCCC
HPGTGRESDLAVFAIVAATAEGTADTGHGHREAEWLSTSQS
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MKRTLRAVCSVVDPRIWLHMLRILHFYGYSHVLPRRRVTMGAGVRMAPNTSIRNGERVSI
CCHHHHHHHHHHCHHHHHHHHHHHHHHCHHHCCCCCEEEECCCEEECCCCCCCCCCEEEE
GSGTRIGERCCLWAGDDHGRVDIGRHTLLGPGVFITASNYRMLPEIPATYQPKDEKDVRI
CCCCCCCCEEEEEECCCCCEEEECCEEEECCCEEEEECCCEECCCCCCCCCCCCCCCEEE
GTDVWLGAGVTVVAGVTVGDGCVVGAGAVVTRSLPEGSIAVGAPARVVGRRGPTGRTPDV
CCCEEECCCEEEEEEEEECCCEEECCCCEEEECCCCCCEEECCCHHHHCCCCCCCCCCCC
HPGTGRESDLAVFAIVAATAEGTADTGHGHREAEWLSTSQS
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1558960; 8801423; 11481432 [H]