| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318274
Identifier: 158318274
GI number: 158318274
Start: 7953117
End: 7953752
Strand: Reverse
Name: 158318274
Synonym: Franean1_6539
Alternate gene names: NA
Gene position: 7953752-7953117 (Counterclockwise)
Preceding gene: 158318275
Following gene: 158318273
Centisome position: 88.55
GC content: 80.19
Gene sequence:
>636_bases ATGTTGCGCCAGCGGCCGGTGAAGTGGGGTCATGGGATACGCGCCTGGGTTCGCGGGCACCGGCGGGTGAGCGGCGGCGT AGGTGGGGTCCTCCTGCTACTGCTGGTAGCGGCCGCCCTCGCGCCGGCGCCGGGGTCGGGCGCGACCCGCTCCGGCGCGG TCGGCGCGCTGGCCGAGCCCGCGCCGGTCGCGATACCGACCACCCCGGGGCCGTCGCCCGCGCCCCCGGTGGCGCCGCCG GCTCCGTCGGCGGTGCCGCGGCCGTCGGTGGCGCCCGCCCGGGTGGCAGTCGCGCCGCCGCCCGCGCCCCCGGTGGCGTC CACATCCCCCATGGAGACGACGCCGGCCGCCGAGCAGGCGGCGGCGCCCACGCCCATGCCGTCGGGCCCCCCGGACCAGG CGCGGCCCACCCGCCCGGCGACCGCGTCCTACCGGTCCTGCGCGGACGCCCGCGCCGCCGGCGCCGCGCCGCTGCACAGG GGCCAGCCGGGGTACCGGTCCGCGCTGGACGACGACGGTGACGGGACCGCGTGCGAGCAGGACAGGCCGTCGGCGCTGTG CGACGAGGGCGCGGGGGCACGGCGAGGCGGGCTGCCCATCCTGGAATACCTGAGCTGCTGGCTGCCCGATCTCTGA
Upstream 100 bases:
>100_bases ACCCGTGCGGTGGTGCCGAAAAGTAGCGACTTTGCTCCGCGCAGTGGCTTTCGCCCCGCTCGTCCGATGAGGATCGGACC AGCGGAGGAGGAACATACGG
Downstream 100 bases:
>100_bases ACCGCGCTCCGTGGGTGGCTTGACATGTACCCCCTAGGGGTATGTAGCTTGCGATCGGCGGGGTGACTCACCGGCGGAGA TCGCCCCGACGGCCGCCGGG
Product: Excalibur domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLRQRPVKWGHGIRAWVRGHRRVSGGVGGVLLLLLVAAALAPAPGSGATRSGAVGALAEPAPVAIPTTPGPSPAPPVAPP APSAVPRPSVAPARVAVAPPPAPPVASTSPMETTPAAEQAAAPTPMPSGPPDQARPTRPATASYRSCADARAAGAAPLHR GQPGYRSALDDDGDGTACEQDRPSALCDEGAGARRGGLPILEYLSCWLPDL
Sequences:
>Translated_211_residues MLRQRPVKWGHGIRAWVRGHRRVSGGVGGVLLLLLVAAALAPAPGSGATRSGAVGALAEPAPVAIPTTPGPSPAPPVAPP APSAVPRPSVAPARVAVAPPPAPPVASTSPMETTPAAEQAAAPTPMPSGPPDQARPTRPATASYRSCADARAAGAAPLHR GQPGYRSALDDDGDGTACEQDRPSALCDEGAGARRGGLPILEYLSCWLPDL >Mature_211_residues MLRQRPVKWGHGIRAWVRGHRRVSGGVGGVLLLLLVAAALAPAPGSGATRSGAVGALAEPAPVAIPTTPGPSPAPPVAPP APSAVPRPSVAPARVAVAPPPAPPVASTSPMETTPAAEQAAAPTPMPSGPPDQARPTRPATASYRSCADARAAGAAPLHR GQPGYRSALDDDGDGTACEQDRPSALCDEGAGARRGGLPILEYLSCWLPDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21108; Mature: 21108
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQRPVKWGHGIRAWVRGHRRVSGGVGGVLLLLLVAAALAPAPGSGATRSGAVGALAEP CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC APVAIPTTPGPSPAPPVAPPAPSAVPRPSVAPARVAVAPPPAPPVASTSPMETTPAAEQA CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH AAPTPMPSGPPDQARPTRPATASYRSCADARAAGAAPLHRGQPGYRSALDDDGDGTACEQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCC DRPSALCDEGAGARRGGLPILEYLSCWLPDL CCCHHHHHCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MLRQRPVKWGHGIRAWVRGHRRVSGGVGGVLLLLLVAAALAPAPGSGATRSGAVGALAEP CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC APVAIPTTPGPSPAPPVAPPAPSAVPRPSVAPARVAVAPPPAPPVASTSPMETTPAAEQA CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHH AAPTPMPSGPPDQARPTRPATASYRSCADARAAGAAPLHRGQPGYRSALDDDGDGTACEQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCC DRPSALCDEGAGARRGGLPILEYLSCWLPDL CCCHHHHHCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA