| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318254
Identifier: 158318254
GI number: 158318254
Start: 7927452
End: 7927931
Strand: Reverse
Name: 158318254
Synonym: Franean1_6519
Alternate gene names: NA
Gene position: 7927931-7927452 (Counterclockwise)
Preceding gene: 158318255
Following gene: 158318252
Centisome position: 88.26
GC content: 72.29
Gene sequence:
>480_bases ATGCCCGTCCTCCGCCGTGCCGCCCGGGTCATCCTGTTCGATCCCGCCGACGCCTTCCTGCTCATCCGGTCGCACGATCC GGATCTTCCCGACGGGCCCACCTGGTGGCATGTACCAGGCGGTGGCCTCGATCCGGGGGAGGAGCCGGCGCAGGCCGGGG TGCGGGAGATCCGGGAGGAGGTCGGGGTGACCGTCGCCGACCTCGGGCCCTGCGTCGCCACCCGGACGGCCTATTTCACC TTCCTCGGCGTGGACTACCGGCAGGAGGAGTCCTTCTTCGTGGCGCGCCTGCCGAACCGGGTCGACGTGGACGACGCGGC GTGGAGCGACGTGGAGCGCCGGGCCACTCTCGGCTGGCGTTGGTGGACCCTCCCGGAGCTGGGATCCACCCCCGACACGG TCTACCCGCCCGCCCTGGCCCCCTTCCTCACCTCCTGGCTCACCGCCGGCCCTCCCGAGACCCCCTACTCCCTCACCTGA
Upstream 100 bases:
>100_bases CGGTGATCGCCGGGGCCGGCCGGGCTGGCGACGGGCCGAGGCCTGGCGACGACGTCCACATGTGCACGTCGGGTGCCGGC CGGACTGGCAGGCTAGGAGA
Downstream 100 bases:
>100_bases GCGCCGGCCGAAACAAATGTGGCGGTTCAGAGAGTCCATGGACTCTCTGAACCGCCACATTTCGCTGCGGGACGGCTACC AGAGGGACGCGTAGGTGCCC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Mutator MutT Protein; MutT/Nudix-Family Hydrolase; MutT/NUDIX Family Hydrolase; MutT-Like Protein; MutT Protein; Nudix Hydrolase; LOW QUALITY PROTEIN MutT/NUDIX Family Protein; NUDIX Family Hydrolase; ADP-Ribose Pyrophosphatase; MutT DNA Repair Protein; Nudix Superfamily Hydrolase; Hydrolase Nudix Family Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPVLRRAARVILFDPADAFLLIRSHDPDLPDGPTWWHVPGGGLDPGEEPAQAGVREIREEVGVTVADLGPCVATRTAYFT FLGVDYRQEESFFVARLPNRVDVDDAAWSDVERRATLGWRWWTLPELGSTPDTVYPPALAPFLTSWLTAGPPETPYSLT
Sequences:
>Translated_159_residues MPVLRRAARVILFDPADAFLLIRSHDPDLPDGPTWWHVPGGGLDPGEEPAQAGVREIREEVGVTVADLGPCVATRTAYFT FLGVDYRQEESFFVARLPNRVDVDDAAWSDVERRATLGWRWWTLPELGSTPDTVYPPALAPFLTSWLTAGPPETPYSLT >Mature_158_residues PVLRRAARVILFDPADAFLLIRSHDPDLPDGPTWWHVPGGGLDPGEEPAQAGVREIREEVGVTVADLGPCVATRTAYFTF LGVDYRQEESFFVARLPNRVDVDDAAWSDVERRATLGWRWWTLPELGSTPDTVYPPALAPFLTSWLTAGPPETPYSLT
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17646; Mature: 17515
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLRRAARVILFDPADAFLLIRSHDPDLPDGPTWWHVPGGGLDPGEEPAQAGVREIREE CCCHHCCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH VGVTVADLGPCVATRTAYFTFLGVDYRQEESFFVARLPNRVDVDDAAWSDVERRATLGWR HCCEEECCCCHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEE WWTLPELGSTPDTVYPPALAPFLTSWLTAGPPETPYSLT EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PVLRRAARVILFDPADAFLLIRSHDPDLPDGPTWWHVPGGGLDPGEEPAQAGVREIREE CCHHCCCEEEEECCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH VGVTVADLGPCVATRTAYFTFLGVDYRQEESFFVARLPNRVDVDDAAWSDVERRATLGWR HCCEEECCCCHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCEE WWTLPELGSTPDTVYPPALAPFLTSWLTAGPPETPYSLT EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA